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Table 1 Locations of the nine VNTR loci within the published genome sequences of B. melitensis and B. suis.

From: Brucella 'HOOF-Prints': strain typing by multi-locus analysis of variable number tandem repeats (VNTRs)

VNTR

Brucella melitensis

 

Brucella suis

 

Locus

Acc. Noα

Region

Location

Strand

Acc. No.

Region

Location

Strand

1

AE009669

Chrom II; Sect. 31

bp-4619

(-)

AE014592

Chrom II; Sect. 88

bp-2372

(+)

 

NC-003318

Chrom II CDS

bp-322922

 

NC-004311

Chrom II CDS

bp-976069

 

2

AE009582

Chrom I; Sect. 139

bp-6689

(+)

AE014357

Chrom I; Sect. 43

bp-6142

(-)

 

NC-003317

Chrom I CDS

bp-1505161

 

NC-004310

Chrom I CDS

bp-477739

 

3

AE009620

Chrom I; Sect. 177

bp-3018

(+)

AE014322

Chrom I; Sect. 8

bp-5823

(-)

 

NC-003317

Chrom I CDS

bp-1915985

 

NC-004310

Chrom I CDS

bp-87085

 

4

AE009669

Chrom II; Sect. 31

bp-10855

(-)

AE014591

Chrom II; Sect. 87

bp-6120

(+)

 

NC-003318

Chrom II CDS

bp-329159

 

NC-004311

Chrom II CDS

bp-969847

 

5

AE009622

Chrom I; Sect. 179

bp-5818

(+)

AE014320

Chrom I; Sect. 6

bp-4014

(-)

 

NC-003317

Chrom I CDS

bp-1940493

 

NC-004310

Chrom I CDS

bp-62866

 

6

AE009586

Chrom I; Sect. 143

bp-2632

(+)

AE014354

Chrom I; Sect. 40

bp-97

(-)

 

NC-003317

Chrom I CDS

bp-1643997

 

NC-004310

Chrom I CDS

bp-438926

 

7

AE009622

Chrom I; Sect. 179

bp-3883

(+)

AE014320

Chrom I; Sect. 6

bp-5972

(-)

 

NC-003317

Chrom I CDS

bp-1938559

 

NC-004310

Chrom I CDS

bp-64824

 

8

AE009499

Chrom I; Sect. 56

bp-166

(-)

AE014439

Chrom I; Sect. 125

bp-10292

(+)

 

NC-003317

Chrom I CDS

bp-588659

 

NC-004310

Chrom I CDS

bp-1399544

 

9

AE009575

Chrom I; Sect. 132

bp-11054

(+)

AE014364

Chrom I; Sect. 50

bp-108

(-)

 

NC-003317

Chrom I CDS

bp-1434245

 

NC-004310

Chrom I CDS

bp-548878

 
  1. α Acc. No. is the GenBank accession number