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Table 1 Probe Design

From: Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction)

Group Name

Sub groupsa

Sequencesb

Ac

Bc

Cc

actinomycetes

9

987

9

5

2

bacilli.

7

281

4

3

1

clostridia

2

284

2

1

0

cyanobacteria

9

223

10

6

3

myxobacteria

2

69

9

9

1

pseudomonads

9

270

20

17

4

  1. a Number of subgroups alignments performed before generating a group-specific consensus b Number of sequences considered for generating the combined subgroups alignments c Number of valid probe pairs after the first (column A), second (B) or third (C) selection step. See text for details
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BMC Microbiology

ISSN: 1471-2180

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