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Figure 4 | BMC Microbiology

Figure 4

From: Avian papillomaviruses: the parrot Psittacus erithacus papillomavirus (PePV) genome has a unique organization of the early protein region and is phylogenetically related to the chaffinch papillomavirus

Figure 4

Phylogenetic analysis of a 312 amino acid alignment (132 E1 and 180 L1 residues, corresponding to nt. 2015–2410 in HPV-1 E1, and nt. 6292–6831 in HPV-1 L1) of 50 human and animal papillomaviruses. Papillomaviruses included (with their GenBank accession numbers) were FPV (K02019, K02020 and U29669), bovine BPV 1 (NC_001522), BPV 2 (NC_001521), BPV4 (X05817), canine oral COPV (NC_001619), cottontail rabbit CRPV (NC_001541), deer DPV (NC_001523), Equus caballus EcPV (AF498323), European elk EEPV (NC_001524), Felis domesticus FdPV 1 (AF480454), HPV 1 (NC_001356), HPV 3 (NC_001588), HPV 4 (NC_001457), HPV 5 (NC_001531), HPV 6 (NC_000904), HPV 9 (NC_001596), HPV 12 (NC_001577), HPV 13 (NC_001349), HPV 15 (NC_001579), HPV 16 (NC_001526), HPV 17(NC_001580), HPV 18 (NC_001357), HPV 19 (NC_001581), HPV 22 (NC_001681), HPV 23 (NC_001682), HPV 25 (NC_001582), HPV 29 (NC_001685), HPV 35 (X74477), HPV 37 (NC_001687), HPV 44 (NC_001689), HPV 48 (NC_001690), HPV 49 (NC_001591), HPV 50 (NC_001691), HPV 51 (NC_001533), HPV 52 (NC_001592), HPV 53 (NC_001593), HPV 56 (NC_001594), HPV 58 (NC_001443), HPV 60 (NC_001693), HPV 63 (NC_001458), HPV 65 (NC_001459), HPV 68 (X67161), HPV 75 (Y15173), Mastomys natalensis MnPV (NC_001605), Ovine OvPV 1 (NC_001789), OvPV 2 (NC_001790), Psittacus erithacus PePV (AF502599), Canine papillomavirus type 2 CPV2 (unpublished), Phocoena spinipinnis PsPV 1 (NC_003348), Rhesus RhPV 1 (NC_001678), and rabbit oral ROPV (NC_002232).

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