S. coelicolorgene (S. lividansgene)b | Putative AdpA-binding sitec | Position (bp) with respect to translation start sitec | Strand locationd | Scorese | Sites in EMSA probesf | |
---|---|---|---|---|---|---|
cchA/cchB* | TGGCCGGATT# | -425# | CS | 9.30 | + | |
TGGCGACATT# | -254# | CS | 5.19 | + | ||
GGGCCGATTC (G7th) | -101 | CS | 4.99 | + | ||
TGGCTCGAAT (C10th) | -86 | NCS | 6.91 | + | ||
ramR | GTGCCGGTTC | -464 | NCS | 3.37 | - | |
TGGCGCGAAA | -384 | NCS | 6.42 | + | ||
CGGCCGAAAA | -358 | NCS | 5.85 | + | ||
GGGCGGGTTC | -280 | NCS | 5.08 | + | ||
TGGCCAGGAC | -279 | CS | 3.86 | + | ||
GGGCGGATAA | -184 | NCS | 3.87 | + | ||
TGTCGTGTTC | -95 | CS | 4.83 | - | ||
CGGCGGAACA | -81 | NCS | 3.15 | - | ||
TGGCCCGAAC | -30 | CS | 7.23 | - | ||
SCO0774/SCO0775* | CGGCGCGTTC | -268 | (-226) | CS | 4.25 | - |
(i.e. SLI0755/SLI0756) | GGACGGGAAC | -253 | (-211) | NCS | 3.37 | + |
GGGCGCGATC | -207 | (-165) | CS | 4.53 | + | |
TGGCGCGATC | -170 | (-128) | NCS | 6.90 | + | |
CGGCCAGTCT | -110 | (-68) | CS | 3.06 | + | |
TGGCCGAACT | -84 | (-42) | CS | 6.20 | - | |
CGGCCAGATC | -79 | (-37) | NCS | 5.84 | - | |
SCO6197/SCO6198* | GGTCCGGACA | -499 | (-547~) | CS | 4.98 | - |
(i.e. SLI6586/SLI6587) | TGACCAGAAG | -414 | (-462~) | CS | 3.82 | + |
TGGCCGAGTT | -362 | (-410~) | CS | 5.06 | + | |
GTTCCTGCAA | -297 | (-345~) | NCS | 3.50 | + | |
GGGCTGAAAC | -271 | (-319~) | NCS | 4.77 | + | |
TGGCTGAATT | -116 | (-164) | CS | 7.85 | + | |
hyaS | TGGCCGGATC | -130 | (-129) | NCS | 8.90 | + |
CGGCCATTTC | -124 | (-123) | CS | 3.05 | + | |
TGTCCAGAAG | -101 | (-100) | NCS | 4.48 | + |