Protein | Locus in NCTC11168 | GI number | Log2change in MH medium | |
---|---|---|---|---|
 |  |  | 00-2425 | 00-2426 |
Iron acquisition | Â | Â | Â | Â |
Iron-uptake ABC transporter ATP-binding protein CfbpC, putative | Cj0173c | gi|218561852 | 1.27 ± 0.75 | 1.10 ± 0.53 |
Iron ABC transporter, permease CfbpB, putative | Cj0174c | gi|121612175 | 0.80 ± 0.71 | 0.90 ± 0 |
Iron-uptake ABC transporter, periplasmic iron-binding protein CfbpA, putative | Cj0175c | gi|218561854 | 2.00 ± 1.30 | 1.97 ± 1.27 |
Iron transport protein, putative | Cj0177 | gi|218561856 | 3.30 ± 0.17 | 2.73 ± 1.05 |
TonB-denpendent outer membrane receptor, putative | Cj0178 | gi|218561857 | 2.70 ± 0.56 | 2.97 ± 0.29 |
Biopolymer transport ExbB protein, TonB transport system | Cj0179 | gi|218561858 | 3.03 ± 0.32 | 3.37 ± 1.61 |
Periplasmic TonB transport protein | Cj0753c | gi|315124276 | 3.5 (single value) | 3.5 (single value) |
Ferric receptor CfrA | Cj0755 | gi|57237601 | 2.37 ± 0.15 | 2.23 ± 0.81 |
Enterochelin uptake ATP-binding protein CeuD | Cj1354 | gi|218562963 | 2.00 ± 1.06 | 2.00 ± 0.56 |
Enterochelin ABC transporter, periplasmic enterochelin-binding protein CeuE | Cj1355 | gi|121612138 | 1.80 ± 0.66 | 1.40 ± 0.26 |
Periplasmic protein P19 | Cj1659 | gi|157415879 | 1.97 ± 1.50 | 2.10 ± 1.04 |
Iron permease, putative | Cj1658 | gi|218563246 | 1.97 ± 1.04 | 1.70 ± 1.01 |
Heme iron utilization protein, putative | Cj1613c | gi|121612296 | 3.60 ± 0.95 | 3.70 ± 0.5 |
TonB-dependent heme receptor ChuA | Cj1614 | gi|57238627 | 3.35 ± 0.35 | 4.20 ± 0 |
TonB-dependent heme receptor ChuA | Cj1614 | gi|157415833 | 1.80 ± 0.70 | 1.73 ± 0.87 |
TonB-dependent heme receptor ChuA | Cj1614 | gi|121613006 | 1.20 ± 0.56 | 0.33 ± 0.64 |
Hemin ABC transporter, permease protein, putative ChuB | Cj1615 | gi|153951720 | 3.17 ± 0.55 | 2.93 ± 1.19 |
Hemin uptake system ATP-binding protein ChuC , putative | Cj1616 | gi|218563205 | 2.97 ± 0.74 | 3.07 ± 0.50 |
Hemin uptake system periplasmic hemin-binding protein, putative | Cj1617 | gi|218563206 | 2.83 ± 0.59 | 2.53 ± 0.42 |
Biopolymer transport ExbD protein, TonB transport system | Cj1629 | gi|153952038 | 1.63 ± 0.81 | 1.57 ± 0.49 |
Integral membrane protein, putative | Cj1660 | gi|218563248 | 1.27 ± 0.81 | 1.5 ± 0.79 |
ABC transporter permease, putative | Cj1661 | gi|218563249 | 1.67 ± 0.97 | 1.57 ± 0.67 |
Integral membrane protein, putative | Cj1662 | gi|218563250 | 1.93 ± 1.15 | 1.60 ± 0.87 |
ABC transporter ATP-binding protein | Cj1663 | gi|157415883 | 1.53 ± 0.80 | 1.53 ± 0.51 |
Oxidative stress | Â | Â | Â | Â |
Thioredoxin reductase | Cj0146c | gi|218561827 | 0.93 ± 0.47 | 0.87 ± 0.5 |
Antioxidant, AhpC/Tsa family | Cj0334 | gi|157414631 | 0.97 ± 0.32 | 0.70 ± 0.20 |
Catalase | Cj1385 | gi|121612952 | 3.37 ± 0.23 | 2.80 ± 0.56 |
Thioredoxin-like protein | Cj1664 | gi|121613144 | 1.23 ± 0.91 | 1.27 ± 1.08 |
Anthranilate synthesis | Â | Â | Â | Â |
Anthranilate synthase component I | Cj0345 | gi|121612335 | 0.80 ± 0.75 | 0.87 ± 0.71 |
Anthranilate synthase component II | Cj0346 | gi|121612640 | 0.67 ± 0.60 | 0.60 ± 0.46 |
N-(5′phosphoribosyl)anthranilate isomerase | Cj0347 | gi|157414644 | 1.00 ± 0.53 | 0.83 ± 0.65 |
Chemotaxis | Â | Â | Â | Â |
Methyl-accepting chemotaxis protein | Cj1189c | gi|121613242 | 0.70 ± 1.10 | 0.07 ± 0.06 |
Methyl-accepting chemotaxis protein | Cj1506c | gi|121613017 | 2.0 ± 1.31 | 3.23 ± 2.40 |
Methionine biosynthesis | Â | Â | Â | Â |
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE | Cj1201 | gi|157415465 | 0.50 ± 0.35 | 1.20 ± 0.26 |
Homoserine O-succinyltransferase MetA | Cj1726c | gi|121613233 | 0.80 ± 0.35 | 1.53 ± 0.55 |
Homoserine O-acetyltransferase MetB | Cj1727c | gi|315125108 | 1.27 ± 0.57 | 1.93 ± 0.9 |
Molybdate transport | Â | Â | Â | Â |
Molybdate transport system ATP-binding protein | Cj0300c | gi|157414597 | 0.67 ± 0.15 | 0.77 ± 0.25 |
Hypothetical protein C8J_0279 molybdenum-pterin-binding protein | Cj0302 | gi|157414599 | 0.30 (single value) | 0.67 ± 0.21 |
Molybdate transport system substrate-binding protein | Cj0303 | gi|157414600 | 0.83 ± 0.75 | 0.77 ± 0.25 |
Hypothetical proteins | Â | Â | Â | Â |
Hypothetical protein C8J_0062 | Cj0069 | gi|157414383 | −0.63 ± 0.06 | −0.60 ± 0.17 |
Hypothetical protein CJJ81176_0110 | Cj0073c | gi|121613178 | −0.93 ± 0.68 | −0.57 ± 0.35 |
Hypothetical protein C8J_0189 | Cj0200c | gi|157414509 | 0.67 ± 0.81 | 0.80 ± 0.78 |
Hypothetical protein Cj0427 | Cj0427 | gi|218562085 | −1.47 ± 0.67 | 0.07 ± 0.58 |
Hypothetical protein CJJ81176_0676 | Cj0648 | gi|121613289 | 0.70 ± 0.28 | 0.50 ± 0.36 |
Hypothetical protein C8J_1185 | Cj1242 | gi|157415505 | −0.60 (single value) | −1.10 ± 0.71 |
Hypothetical protein C8J_1529 | Cj1627c | gi|157415847 | 0.60 ± 0.20 | 0.50 ± 0.61 |
Hypothetical protein CJJ81176_1628 | Cj1637c | gi|121613390 | −0.33 ± 0.15 | −0.73 ± 0.35 |
Hypothetical protein C8J_1561 | Cj1659 | gi|157415879 | 1.97 ± 1.50 | 2.10 ± 1.04 |
Hypothetical protein CJE0598 CJIE2 prophage | not present | gi|57238304 | 1.10 ± 0.28 | 0.77 ± 0.40 |
Hypothetical protein CXIVA_22050 | not present | gi|339443269 | 0.67 ± 0.57 | 0.50 ± 0.53 |
Transporters | Â | Â | Â | Â |
Sodium/dicarboxylate symporter | Cj0025c | gi|121612756 | 0.80 ± 0.66 | 0.40 ± 0.44 |
Anaerobic C4-dicarboxylate transporter | Cj0088 | gi|218561769 | −1.10 ± 0.61 | −0.63 ± 0.23 |
OPT family oligopeptide transporter | Cj0204 | gi|121613125 | 0.73 ± 0.21 | 0.50 ± 0.17 |
Other function or unknown function | Â | Â | Â | Â |
Non-haem iron protein | Cj0012c | gi|218561705 | −0.83 ± 0.61 | −0.77 ± 0.64 |
Cytochrome c family protein | Cj0037c | gi|121612292 | 0.93 ± 0.21 | 1.03 ± 0.35 |
Aspartate ammonia-lyase | Cj0087 | gi|157414400 | −1.10 ± 0.50 | −1.1 ± 0.40 |
Periplasmic protein, putative | Cj0093 | gi|218561774 | 0.80 ± 0.53 | 0.80 ± 0.56 |
Superoxide dismutase, Fe | Cj0169 | gi|157414485 | −1.23 ± 0.84 | −1.20 ± 1.47 |
Superoxide dismutase, Fe | Cj0169 | gi|153951398 | −3.70 ± 2.95 | −0.93 ± 0.97 |
Integral membrane protein | Cj0236c | gi|153952171 | 0.53 ± 0.75 | 0.97 ± 0.76 |
Chemotaxis histidine kinase | Cj0284c | gi|218561946 | −0.83 ± 0.61 | −0.53 ± 0.42 |
Ferredoxin 4Fe-4S | Cj0333c | gi|121612302 | −1.10 ± 0.89 | 0.53 ± 0.15 |
Tryptophan synthase subunit alpha | Cj0349 | gi|121613100 | 0.67 ± 0.47 | 0.80 ± 0.56 |
Cytochrome c551 peroxidase | Cj0358 | gi|121612870 | −0.67 ± 0.55 | 0.50 ± 0.17 |
Putative integral membrane protein | Cj0421c | gi|218562079 | 1.00 ± 0.71 | 0.73 ± 0.12 |
Putative periplasmic protein | Cj0425 | gi|218562083 | 1.70 (single value) | 1.10 (single value) |
Succinate dehydrogenase flavoprotein subunit | Cj0437 | gi|218562095 | −0.70 ± 0.44 | −0.6 ± 0.87 |
DNA polymerase III subunit epsilon | Cj0452 | gi|218562107 | −0.23 ± 0.21 | −0.67 ± 0.31 |
Thiamine biosynthesis protein ThiC | Cj0453 | gi|121613325 | −2.23 ± 0.38 | −1.83 ± 0.32 |
ATP-dependent chaperone protein ClpB | Cj0509c | gi|121613623 | −0.33 ± 0.15 | −0.67 ± 0.15 |
2-oxoglutarate-acceptor oxidoreductase subunit OorD | Cj0535 | gi|157414816 | −0.87 ± 0.55 | 0.63 ± 0.66 |
2-oxoglutarate-acceptor oxidoreductase subunit OorA | Cj0536 | gi|157414817 | −0.73 ± 0.32 | −0.67 ± 0.15 |
Aminohydrolase family protein, putative | Cj0556 | gi|218562208 | 0.90 ± 0.57 | 1.13 ± 0.71 |
Quinol dehydrogenase membrane component NapH | Cj0782 | gi|121612888 | −0.67 ± 0.49 | −0.55 ± 0.35 |
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | Cj0835c | gi|218562463 | −1.00 ± 0.26 | −0.93 ± 0.59 |
Thermonuclease family protein | Cj0979c | gi|121612563 | −0.83 ± 0.38 | −0.73 ± 0.68 |
Amino acid transporter, periplasmic solute-binding protein, putative | Cj0982c | gi|218562598 | 1.03 ± 0.38 | 0.77 ± 0.4 |
Arginyl-tRNA-protein transferase | Cj1035c | gi|121613462 | −0.73 ± 0.29 | −0.60 ± 0.26 |
Flippase | Cj1130c | gi|218562744 | −0.27 ± 0.38 | −0.67 ± 0.42 |
Cytochrome c553 | Cj1153 | gi|157415419 | −0.77 ± 0.25 | −0.53 ± 0.38 |
Cyclopropane fatty acid biosynthesis | Cj1183c | gi|57238055 | 1.07 ± 0.67 | 0.73 ± 0.32 |
NLPA family lipoprotein, putative | Cj1200 | gi|218562812 | 0.47 ± 0.83 | 1.20 ± 0.56 |
Hemerythrin family non-heme iron protein | Cj1224 | gi|121612625 | −0.73 ± 0.25 | −0.07 ± 0.21 |
Quinone-reactive Ni/Fe-hydrogenase, small subunit | Cj1267c | gi|157415531 | −0.63 ± 0.46 | −0.57 ± 0.21 |
Endoribonuclease L-PSP, putative | Cj1388 | gi|218562997 | 0.77 ± 0.21 | 0.40 ± 0.36 |
Putative Ni/Fe-hydrogenase small subunit | Cj1399c | gi|218563003 | 0.73 ± 0.31 | 0.57 ± 0.15 |
Hypothetical protein C8J_1356 ATP/GTP-binding protein | Cj1450 | gi|157415675 | −0.87 ± 0.38 | −0.80 ± 0.46 |
Transformation system protein CtsX | Cj1472 | gi|121612126 | −0.55 ± 0.7 | −1.20 (single value) |
Transformation system protein CtsP | Cj1473c | gi|121613067 | −0.65 ± 0.07 | −0.13 ± 0.31 |
Pyruvate-flavodoxin oxidoreductase | Cj1476c | gi|315124909 | −0.87 ± 0.38 | 0.63 ± 0.42 |
Formate dehydrogenase, iron-sulfur subunit | Cj1510c | gi|157415732 | −0.73 ± 0.71 | −0.73 ± 0.45 |
Dephospho-CoA kinase | Cj1530 | gi|218563123 | 0.73 ± 0.68 | 0.57 ± 0.74 |
Multidrug transporter membrane component/ATP-binding component | Cj1587c | gi|121613099 | 1.40 ± 0.53 | 1.00 ± 0.44 |
Two-component regulator (DNA binding response regulator), putative | Cj1608 | gi|218563197 | −0.07 ± 0.31 | −2.50 ± 1.65 |
Citrate synthase | Cj1682c | gi|157415898 | −0.80 ± 0.36 | −0.73 ± 0.21 |
50S ribosomal protein L2 | Cj1704c | gi|121612340 | −0.47 ± 0.85 | −0.80 ± 0.46 |
2-isopropylmalate synthase | Cj1719c | gi|121612265 | 0.83 ± 0.68 | 0.67 ± 0.21 |
Hypothetical protein CJE0598 CJIE2 prophage | CJE0598 | gi|57238304 | 1.10 ± 0.28 | 0.77 ± 0.4 |
Flagellin | CJE1526 | gi|57238729 | −0.87 ± 0.25 | −0.80 ± 0.44 |