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Table 5 Effect of media differing in iron concentration and inclusion of bile salts on expression of consensus proteins differentially regulated by the presence or absence of CJIE1 in initial experiments

From: The CJIE1 prophage of Campylobacter jejuni affects protein expression in growth media with and without bile salts

     Log2change
Protein COG GI number Locus in NCTC 11168 0.1% sodium deoxycholate 2.5% Oxgall
  00-2425 00-2426 00-2425 00-2426
Invasion phenotype protein CipA R gi|157414972 Cj0685c 1.17 ± 0.30 1.57 ± 0.35 1.13 ± 0.46 1.20 ± 0.66
phosphate acetyltransferase Pta R gi|121613717 Cj0688 0.07 ± 0.30 1.10 (n = 1) −0.93 ± 0.21 1.90 (n = 1)
Acetate kinase AckA C gi|57236992 Cj0689 −1.27 ± 0.10 −1.00 ± 0.60 −0.57 ± 0.50 −0.50 ± 0.36
Aspartate carbamoyltransferase catalytic subunit PyrB F gi|218562712 Cj1098 0.80 ± 0.30 1.00 ± 0.20 0.50 ± 0.40 0.73 ± 0.25
Oligoendopeptidase F PepF E gi|218562713 Cj1099 −0.87 ± 0.20 −0.90 ± 0.17 −0.03 ± 0.06 −0.13 ± 0.23
ATP-dependent DNA helicase UvrD L gi|121612511 Cj1101 1.20 ± 0.30 1.40 ± 0.17 1.40 ± 0.36 1.40 ± 0.10
Hypothetical protein Cj1429c S gi|218563033 Cj1429c 0.33 ± 0.40 1.45 ± 0.49 1.13 ± 0.25 2.5 ± 0
Methyltransferase protein   gi|218563030 Cj1426c 0.43 ± 0.30 0.97 ± 0.21 0.23 ± 0.40 0.33 ± 0.70
  1. Expression of proteins on MH + blood was set as the reference separately for isolates 00–2425 and 00–2426 against which fold change on each of the different growth media was calculated for each isolate.
  2. COGs, [C] Energy production and conversion; [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism; [K] Transcription; [L] Replication, recombination, and repair; [Q] Secondary metabolites biosynthesis, transport and catabolism; [R] General function prediction only; [S] Function unknown.