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Table 1 Results for detection and genotyping samples from a single bovine dairy herd

From: High prevalence and two dominant host-specific genotypes of Coxiella burnetii in U.S. milk

Sample ID Sample source IS1111 result* Genotyping result
M0101 Individual cow 1/9, 39.49 Undetermined
M0100 Individual cow 1/9, 39.50 Undetermined
M0086 Individual cow 1/9, 42.29 Undetermined
M0099 Individual cow 9/9, 31.05 ST20
M0084 Individual cow Negative n/a
M0085 Individual cow Negative n/a
M0087 Individual cow Negative n/a
M0088 Individual cow Negative n/a
M0089 Individual cow Negative n/a
M0090 Individual cow Negative n/a
M0091 Individual cow Negative n/a
M0092 Individual cow Negative n/a
M0093 Individual cow Negative n/a
M0094 Individual cow Negative n/a
M0095 Individual cow Negative n/a
M0096 Individual cow Negative n/a
M0097 Individual cow Negative n/a
M0098 Individual cow Negative n/a
M0102 Individual cow Negative n/a
M0103 Individual cow Negative n/a
M0106 Bulk tank 8/9, 36.08 ST20
M0105 Bulk tank 9/9, 35.09 ST20
M0104 Bulk tank 9/9, 35.49 ST20
  1. *Results are given as the total number of replicates that amplified out of nine replicates, followed by the average Ct value for all amplifying replicates.