Target | Primers sequences (5'-sequence-3') | Fragment size (bp) | Annealing | Reference |
---|---|---|---|---|
16S rRNA | GCGGCGTGCCTAATACATGC | 700 | 42°C | [29] |
ATCTACGCATTTCACCGCTAC | ||||
phe S | CAYCCNGCHCGYGAYATGC | 470 | 46°C | [30] |
CCWARVCCRAARGCAAARCC | ||||
lan B | TATGATCGAGAARYAKAWAGATATGG | 400-500 | 40°C | |
TTATTAIRCAIATGIAYDAWACT | ||||
lan C | TAATTTAGGATWISYIMAYGG | 200-300 | 40°C | |
ACCWGKIIIICCRTRRCACCA | ||||
lan M | ATGCWAGWYWTGCWCATGG | 200-300 | 40°C | |
CCTAATGAACCRTRRYAYCA | ||||
nis | GGATAGTATCCATGTCTG | 250 | 55°C | [31] |
CAATGATTTCGTTCGAAG | ||||
ent A | CATCATCCATAACTATATTTG | 126 | 56°C | [32] |
AAATATTATGGAAATGGAGTGTAT | ||||
ent B | GAAAATGATCACAGAATGCCTA | 162 | 58°C | [32] |
GTTGCATTTAGAGTATACATTTG | ||||
ent P | TATGGTAATGGTGTTTATTGTAAT | 120 | 58°C | [32] |
ATGTCCCATACCTGCCAAAC | ||||
ent L50AB | STGGGAGCAATCGCAAAATTAG | 98 | 56°C | [32] |
ATTGCCCATCCTTCTCCAAT | ||||
ent AS48 | GAGGAGTITCATGATTTAAAGA | 340 | 56°C | [32] |
CATATTGTTAAATTACCAAGCAA |