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Table 2 Homologues of β-lactamase genes detected in the human gut microbiota via PCR techniques

From: A degenerate PCR-based strategy as a means of identifying homologues of aminoglycoside and β-lactam resistance genes in the gut microbiota

Accession # Gene description Closest homologue E value % identity
Bla TEM     
ADE18890.1 β-lactamase TEM-1 S. enterica subsp. enterica 5e-154 99
AAS46844.1 β-lactamase TEM-1 S. marcescens 2e-156 100
AEN02824.1 β-lactamase TEM-1 K. pneumoniae 3e-111 99
AEN02817.1 β-lactamase TEM-1 K. pneumoniae 1e-113 99
ACV88636.1 β-lactamase TEM-1 E. coli 2e-151 99
AEL87577.1 ES β-lactamase TEM-116 Vibrio parahaemolyticus 5e-154 99
AEQ55231.1 β-lactamase TEM-1 E. coli 1e-35 45
ABQ14376.1 β-lactamase Uncultured soil bacterium 6e-05 83
ADN79104.1 β-lactamase TEM Escherichia vulneris 1e-15 86
WP_010157942.1 β-lactamase TEM Sar 86 cluster bacterium 9e-122 83
ACI29961.1 β-lactamase TEM-1 E. coli 2e-153 99
AEQ39590.1 β-lactamase TEM-195 E. coli 5e-93 96
AAM22276.1 β-lactamase TEM-96 E. coli 7e-139 94
WP_019405145.1 β-lactamase TEM K. pneumoniae 4e-155 99
AEW28787.1 β-lactamase TEM-1 Uncultured bacterium 1e-133 100
ABY81267.1 β-lactamase E. coli 4e-156 100
AAF74292.1 ES β-lactamase E. coli 5e-155 99
AFU53026.1 KPC-2 β lactamase S. marcescens 2e-112 98
ADE18896.1 β-lactamase TEM-1 Salmonella enterica 2e-113 99
AEN02826.1 β-lactamase TEM-1 K. pneumoniae 4e-113 99
Bla ROB     
YP_252228.1 Hypothetical protein SH0313 S. haemolyticus 2e-33 44
Bla SHV     
WP_009348253.1 Hypothetical protein HMPREF 9332 Alloprevotella rava 3e-07 56
WP_017896153.1 β-lactamase K. pneumoniae subsp. pneumoniae 0.0 99
WP_008157744.1 Hypothetical protein HMPREF 1077 Parabacteroides johnsonii 1.5 29
CAJ47138.2 β-lactamase K. pneumoniae 0.0 99
ADU15837.1 BlaSHV132 K. pneumoniae 0.0 99
AEK80394.1 β-lactamase SHV140 K. pneumoniae 0.0 99
ABS72351.1 β-lactamase SHV103 K. pneumoniae 0.0 99
AAP03063.1 β-lactamase SHV48 K. pneumoniae 0.0 99
AEG79634.1 ES β-lactamase SHV120 E. coli   99
Bla CTX-M     
ABG46354.1 ES β-lactamase E. coli 3e-139 99
AEZ49563.1 β-lactamase CTX-M-1 E. coli 2e-138 99
AEZ49551.1 β-lactamase CTX-M-1 K. pneumoniae 1e-139 100
ABG46356.1 ES β-lactamase K. pneumoniae 9e-139 97
ABW06480.1 ES β lactamase CTX-M-15 K. pneumoniae 6e-51 94
AAB22638.1 β-lactamase penicillin hydrolase E. coli 9e-140 100
BAD16611.1 β-lactamase CTX-M-36 E. coli 8e-139 99
YP_003717483.1 β-lactamase E. coli 2e-139 100
ABN09669.1 β-lactamase CTX-M-61 S. enterica 2e-138 100
  1. ESBL: extended spectrum β-lactamase. Gene names are in bold.