Name | Primer sequence (5’-3’) | Gene target | Taxon target | Reference |
---|---|---|---|---|
6S-27F | AGAGTTTGATCCTGGCTCAG | 16S rRNA | Bacteria | [19] |
338R | GCTGCCTCCCGTAGGAGT | 16S rRNA | Bacteria | [19] |
α682F | CIAGTGTAGAGGTGAAATT | 16S rRNA | α-Proteobacteria | [18] |
908αR | CCCCGTCAATTCCTTTGAGTT | 16S rRNA | α-Proteobacteria | [18] |
1080γF | TCGTCAGCTCGTGTYGTGA | 16S rRNA | γ-Proteobacteria | [18] |
γ1202R | CGTAAGGGCCATGATG | 16S rRNA | γ-Proteobacteria | [18] |
Act920F3 | TACGGCCGCAAGGCTA | 16S rRNA | Actinobacteria | [18] |
Act1200R | TCRTCCCCACCTTCCTCCG | 16S rRNA | Actinobacteria | [18] |
Lgc353 | GCAGTAGGGAATCTTCCG | 16S rRNA | Firmicutes | [17] |
Eub518 | ATTACCGCGGCTGCTGG | 16S rRNA | Firmicutes | [17] |
MB4 | CCGCGTGAGTGATGAAGG | 16S rRNA | Methylobacterium | [21] |
MB | AGCGCCGTCGGGTAAGA | 16S rRNA | Methylobacterium | [21] |
Sph-spt 694f | GAGATCGTCCGCTTCCGC | spt | Sphingomonas | [22] |
Sph-spt 983r | CCGACCGATTTGGAGAAG | spt | Sphingomonas | [22] |
Gro1 | CTGGAAGACATCGCGATC | groEL | Burkholderia | [20] |
Gro2 | CGTCGATGATCGTCGTGTT | groEL | Burkholderia | [20] |
pagF | CACTGGAAACGGTGGCTAAT | 16S rRNA | Pantoea | [23] |
pagR | CGGCAGTCTCCTTTGAGTTC | 16S rRNA | Pantoea | [23] |