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Table 2 Functional classification of the 82 CDSs in the IME-AB2 genome

From: Characterization, sequencing and comparative genomic analysis of vB_AbaM-IME-AB2, a novel lytic bacteriophage that infects multidrug-resistant Acinetobacter baumannii clinical isolates

Category

CDSs and putative functions

Structural proteins

CDS.12 putative capsid protein.

CDS.13 putative structural protein.

CDS.24 putative phage head protein.

CDS.71 putative tail fiber.

CDS.72 similar to the N-terminal region of tail fiber protein.

CDS.74 putative baseplate J-like protein.

CDS.77 putative phage baseplate assembly protein.

Metabolic proteins

CDS.06 putative cobalt transport protein.

CDS.08 putative RNA polymerase.

CDS.33 putative binding HTH domain or homeodomain-like.

CDS.47 putative bacteriophage-associated immunity protein.

CDS.52 putative HNH endonuclease domain protein.

CDS.66 putative nucleoside triphosphate pyrophosphohydrolase.

CDS.68 putative lysozyme family protein.

CDS.81 putative lysozyme protein.

Replication/packaging-associated proteins

CDS.26 putative phage head portal protein.

CDS.27 putative phage terminase, large subunit.

CDS.28 putative phage terminase,small subunit.

CDS.50 putative replicative DNA helicase.

CDS.51 putative primosomal protein.

CDS.58 putative transcriptional regulator.

CDS.62 putative recombinational DNA repair protein.

Other hypothetical proteins

CDS.1,2,3,4,5,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,25,26,29,30,31,

32,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,51,53,54,55,56,57,59,60,

 

61,63,64,65,67,69,70,73,75,76,78,79,80,82.