Table 3 Pathogenicity island-like regions in E. rhusiopathiae strain SY1027 genome
PAI-L # | Start | End | Size | %GC | flanked by tRNA | PAIs homologous to this region^ | No. of ORF in homo. PAI* | Potential VFф |
|---|---|---|---|---|---|---|---|---|
PAI-L01 | 806018 | 811037 | 5020 | 37.5 | N.F. | VPI-2 (Vibrio cholerae O1) | 8 | N.F. |
PAI-L02 | 826289 | 835010 | 8721 | 34.2 | N.F. | PAI CFT073 (E. coli CFT073), SHI-2 (Shigellaflexneri M90T), HPI (Yersinia enterocolitica WA 314) | 11 | groEL |
PAI-L03 | 886571 | 889469 | 2898 | 35.8 | tRNA-Lys (tRNA02) | Not named (Enterococcus faecalis MMH594, V583) | 7 | N.F. |
PAI-L04 | 973651 | 985197 | 11546 | 36.7 | tRNA-Arg (tRNA03) | Not named (Enterococcus faecalis MMH594, V583) | 15 | N.F. |
PAI-L05 | 1619897 | 1622633 | 2736 | 36.4 | N.F. | Not named (Enterococcus faecalis MMH594, V583) | 5 | N.F. |