Skip to main content
Figure 5 | BMC Microbiology

Figure 5

From: Colony-live a high-throughput method for measuring microbial colony growth kinetics reveals diverse growth effects of gene knockouts in Escherichia coli

Figure 5

Global functional map of genes of SKO mutants showing long LTG and low SPG. Genes screened by the Colony-live method were mapped onto the global map and colored as in Figure 4: long LTG + slow MGR (blue), low SPG + slow MGR (red), or long LTG + low SPG + slow MGR (green) except genes marked [a] with slow SPG with normal MGR, cysABCD, aceEF and mdh and [b] with low SPG with weak significance (p < 0.05, FDR < 0.05). Essential genes in LB (black), reaction direction (solid arrows), functional unit (boxes) and group (rounded boxes), and inner and outer membrane (gray boxes) are shown. ROS: Reactive oxygen species; UQ-8: Ubiquinone-8; OAS: O-acetylserine; KAS: β-ketoacyl-ACP synthases; OMP: Outer membrane proteins; Sec: SecYEG translocase.

Back to article page