Table 5 Genes of the putative T6SSs I and II of Francisella isolate W12-1067
Name (T6SS I) | Peg Nr. (aa) | kDa | Feature | Closest homolog (% aa identity) |
|---|---|---|---|---|
OrfD1 | 950 (92) | 9.9 | DUF2345, VgrG-like, Rhs family | FTN_0038 (57%) |
OrfC1 | 951 (138) | 15.7 | SP, lipid attachment site (IglE-like) | FTN_0039 (66%) |
OrfB1 | 952 (1097) | 127.1 | SP, TM domain (PdpB-like/TssM) | FTN_0040 (58%) |
OrfA1 | 953 (735) | 84.6 | Cl* | FTN_0041 (63%) |
Orf48 | 954 (48) | 5.8 | SP | --- |
ImpB1 | 955 (179) | 20.8 | homologous to IglA/TssB | FTN_0042 (96%) |
ImpC1 | 956 (508) | 57.7 | homologous to IglB/TssC | FTN_0043 (91%) |
OrfE1 | 957 (214) | 23.1 | helical bundle domain (putative TssD) | FTN_0044 (77%) |
OrfF1 | 958 (356) | 41.3 | Cl | FTN_0045 (51%) |
OrfG1 | 059 (406) | 47.3 | Cl, T6SS-associated like protein | FTN_0048 (72%) |
OrfH1 | 960 (274) | 31.9 | C-terminal TM domain | FTN_0049 (63%) |
OrfI1 | 961 (501) | 58.6 | Cl | FTN_0050 (72%) |
OrfJ1 | 962 (203) | 23.8 | DUF2077 (putative DotU/TssL) | FTN_0051 (63%) |
OrfK1 | 963 (126) | 13.1 | DUF4280 | FTN_0054 (82% |
Orf374 | 964 (374) | 43.3 | Cl | Hyp. protein (33%) Flavobacterium |
IglD3 | 1538 (398) | 46.1 | DUF876 (TssK) | IglD (49%) F-TX077308 |
Name (T6SS II) | Peg Nr. | kDa | Feature | Closest homolog (% aa identity) |
ImpB2 | 1376 (177) | 19.9 | Cl, homologous to IglA/TssB, DUF770 | FTN_0042 (42%) |
ImpC2 | 1375 (493) | 55.5 | Cl, homologous to IglB/TssC, COG3517 | FTN_0043 (47%) |
Orf204 | 1374 (204) | 22.4 | Cl, | --- |
OrfG2 | 1373 (405) | 47.1 | Cl, IglD-like | F7308_1914 (28%) |
Orf368 | 1372 (368) | 43.4 | Cl | --- |
OrfL | 1371 (629) | 74.6 | Hypothetical protein | F7308_1916 (33%) |
Orf96 | 1370 (96) | 11.1 | 2 TM domains | Hyp. protein (49%) Prevotella histicola |
OrfB2 | 1369 (928) [1020] | 106.3 | Cytoplasmic membrane, SP | FTN_0040 (20%) |
Orf457 | 1368 (457) | 53.4 | Hypothetical protein | --- |
Orf254 | 1367 (254) | 30.3 | Cl | --- |
OrfC2 | 1366 (146) | 17 | SP | FTN_0039 (24%) |
OrfJ2 | 1365 (195) | 23.1 | DUF2077 (putative DotU/TssL) | DotU, (29%) Desulfonatronospira |
OrfD2 | 1364 (111) | 12.4 | Cl (DUF2345, vgrG) | --- |
ORF705 | 1363 (705) | 77.7 | Cl | --- |