Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers

Table 3 Assignment of haplotypes and clonal diversity in the Colombian Eastern Plains

Molecular marker	Location	No. isolates	No. haplotypes	No. repeted haplotypes	Corrected Nei’s index	Corrected Shannon’s index
Molecular marker	Location	No. isolates	No. haplotypes	No. repeted haplotypes	Div_obs	Div_obs
AFLP	La Libertad	47	33	4	0.967*	1.802*
	Granada	3	3	-	1.000	nan
	Fuente de Oro	1	1	-	nan	nan
	Orocué	50	39	7	1.000	nan
	Reference	10	10	-	0.985	2.001*
	Overall	111	86	13	0.991*	2.331*
VNTR	La Libertad	47	39	6	0.988*	2.163*
	Granada	3	3	-	1.000	nan
	Fuente de Oro	1	1	-	nan	nan
	Orocué	50	34	6	0.940*	1.783*
	Reference	10	10	-	0.978	1.653*
	Overall	111	87	12	0.984*	2.356*

ISSN: 1471-2180