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Table 1 Characteristics of VNTR loci evaluated in Xam isolates from the Colombian Eastern Plains

From: Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers

VNTR locus

Repeat

Number of different alleles

Range of allele repetitions

Dominant alleles

HGDI index

G1_02

TCCCCAT

7

1 - 9

4 8

0.7019

G1_29

ATCCCGA

17

1 - 23

5

0.858

G1_52

CCGCCACAACGCA

7

4 - 10

6

0.5873

G1_67

CGACAC

14

10 - 26

16 26

0.8428

G1_73

GGTCAT

8

5 - 12

6 7 9

0.797

  1. VNTR loci were selected according to discriminant index reported by Arrieta and collaborators[36].
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BMC Microbiology

ISSN: 1471-2180

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