Skip to main content

Advertisement

Table 2 Nitrogen metabolism gene matches and the number of sequences from the +NO 3 - metagenome that matched with the genes, as determined with a BLASTN comparison

From: Shotgun metagenomic analysis of metabolic diversity and microbial community structure in experimental vernal pools subjected to nitrate pulse

Query sequence1 N Metabolism gene # Database sequences Average%ID Average alignment length Average E-value
+NO3- seq. 1 napA 3 92.83 65 7.33E-18
+NO3- seq. 2 napA 125 83.83 131.29 9.86E-08
  napB 1 82.35 119 4.00E-11
  1. 1The query sequence indicates that only two sequences out of 28,688 in the +NO3- metagenome matched with sequences in the N metabolism database. Seq. 1 matched with three database entries, while seq. 2 matched with 126 database entries.