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Figure 4 | BMC Microbiology

Figure 4

From: Detection of phase-dependent transcriptomic changes and Rubisco-mediated CO2 fixation into poly (3-hydroxybutyrate) under heterotrophic condition in Ralstonia eutropha H16 based on RNA-seq and gene deletion analyses

Figure 4

Transcription levels of genes involved in fatty acid biosynthesis and β-oxidation in R. eutropha H16 at growth phase F16, PHA production phase F26, and stationary phase F36 on fructose. With respect to β-oxidation enzymes, selected genes of which specific name has been assigned, or RPKM value are larger than 1,000 at least one of the three phases are shown. The log2-transformed RPKM values are visualized using the rainbow color scale in the figure. Genes with the P value above the threshold (P > 0.05) are underlined. Abbreviations: ACP, acyl-carrier protein; BC, biotin carboxylase; CT, carboxyl transferase; BCCP, biotin carboxyl carrier protein; (R)-3HB-CoA, (R)-3-hydroxybutyryl-CoA; (R)-3HA-CoA, (R)-3-hydroxyacyl-CoA; (R)-3HA-ACP, (R)-3-hydroxyacyl-acyl carrier protein. A0461, A1526, and B0724 are genes for putative β-oxidation multifunctional enzymes.

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