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Table 2 Comparison of 16S rRNA gene libraries between the OL and CS groups

From: Molecular diversity of rumen bacterial communities from tannin-rich and fiber-rich forage fed domestic Sika deer (Cervus nippon) in China

OL group

CS group

Phylotype

Clonesa

OTU#

Nearest Taxon

%b

Phylotype

Clonesa

OTU#

Nearest Taxon

%b

SDMOL10

1

1

P. brevis

89

SDCS52

1

1

P. brevis

90

SDMOL20

1

2

P. brevis

89

SDCS61

1

2

P. brevis

90

SDMOL48

1

3

P. brevis

89

SDCS69

6

3

P. brevis

90

SDMOL69

1

4

P. brevis

89

SDCS71

2

4

P. brevis

90

SDMOL96

10

5

P. brevis

89

SDCS1

3

5

P. brevis

91

SDMOL29

2

6

P. brevis

89

SDCS74

1

6

P. brevis

91

SDMOL33

1

7

P. brevis

90

SDCS80

1

7

P. brevis

91

SDMOL38

1

8

P. brevis

90

SDCS14

1

8

P. brevis

92

SDMOL80

1

9

P. brevis

90

SDCS40

4

9

P. brevis

92

SDMOL91

1

10

P. brevis

90

SDCS49

3

10

P. brevis

92

SDMOL107

1

11

P. brevis

90

SDCS41

5

11

P. brevis

92

SDMOL108

1

12

P. brevis

90

SDCS5

1

12

P. brevis

93

SDMOL115

2

13

P. brevis

90

SDCS8

1

13

P. brevis

93

SDMOL120

2

14

P. brevis

90

SDCS93

6

14

P. brevis

93

SDMOL4

1

15

P. brevis

91

SDCS16

2

15

P. brevis

98

SDMOL27

2

16

P. brevis

91

SDCS85

1

16

P. salivae

90

SDMOL32

1

17

P. brevis

91

SDCS48

2

17

P. salivae

91

SDMOL84

2

18

P. brevis

91

SDCS2

1

18

P. salivae

92

SDMOL92

2

19

P. brevis

91

SDCS90

1

19

P. ruminicola

91

SDMOL17

5

20

P. brevis

92

SDCS98

5

20

P. ruminicola

92

SDMOL55

1

21

P. brevis

92

SDCS53

1

21

P. ruminicola

93

SDMOL68

8

22

P. brevis

92

SDCS54

3

22

P. ruminicola

93

SDMOL110

4

23

P. brevis

92

SDCS78

1

23

P. ruminicola

93

SDMOL70

1

24

B. intestinihominis

86

SDCS37

7

24

P. ruminicola

93

SDMOL5

1

25

P. shahii

86

SDCS44

1

25

P. ruminicola

94

SDMOL21

1

26

P. shahii

88

SDCS47

1

26

P. ruminicola

94

SDMOL71

2

27

P. shahii

89

SDCS94

1

27

P. ruminicola

94

SDMOL18

1

28

P. shahii

90

SDCS11

1

28

P. ruminicola

95

SDMOL30

1

29

P. shahii

90

SDCS9

5

29

P. ruminicola

95

SDMOL75

10

30

P. shahii

90

SDCS87

2

30

Par. clara

88

SDMOL76

1

31

P. shahii

90

SDCS7

1

31

Par. clara

89

SDMOL82

2

32

P. shahii

90

SDCS60

1

32

P. shahii

85

SDMOL88

1

33

P. shahii

90

SDCS76

2

33

P. shahii

85

SDMOL109

1

34

P. shahii

90

SDCS13

1

34

P. shahii

90

SDMOL118

1

35

P. shahii

90

SDCS86

1

35

P. veroralis

91

SDMOL7

1

36

P. bryantii

90

SDCS77

1

36

P. veroralis

92

SDMOL28

1

37

P. copri

87

SDCS104

1

37

P. dentalis

91

SDMOL26

1

38

P. copri

89

SDCS88

1

38

P. albensis

87

SDMOL135

1

39

P. copri

91

SDCS21

1

39

Ros. hominis

90

SDMOL34

1

40

P. salivae

89

SDCS28

1

40

Pab. merdae

84

SDMOL47

2

41

P. salivae

90

SDCS20

8

41

S. dextrinosolvens

97

SDMOL64

3

42

P. salivae

91

SDCS89

1

42

Rum. bromii

90

SDMOL74

3

43

P. salivae

91

SDCS36

1

43

Rum. bromii

95

SDMOL98

5

44

P. salivae

91

SDCS97

1

44

Rum. bromii

95

SDMOL139

3

45

P. salivae

92

SDCS38

1

45

Pab. merdae

84

SDMOL63

1

46

P. veroralis

91

SDCS50

1

46

Pro. acetatigenes

83

SDMOL44

16

47

P. veroralis

92

SDCS83

1

47

A. shahii

85

SDMOL136

16

48

P. veroralis

92

SDCS96

1

48

Sp. acetigenes

84

SDMOL53

1

49

P. albensis

91

SDCS102

1

49

C. aldrichii

86

SDMOL58

2

50

P. stercorea

87

SDCS105

1

50

C. bolteae

91

SDMOL100

1

51

P. multiformis

91

     

SDMOL117

1

52

P. ruminicola

92

     

SDMOL143

1

53

P. dentalis

91

     

SDMOL31

1

54

A. shahii

85

     

SDMOL37

1

55

A. shahii

88

     

SDMOL127

1

56

S. dextrinosolvens

97

     

SDMOL66

1

57

P. brevis

87

     
  1. P Prevotella, S Succinivibrio, A Alistipes, Par Paraprevotella, Ros Roseburia, Rum Ruminococcus, Sp Sporanaerobacter, C Clostridium, Pab Parabacteroides, Pro Proteiniphilum, B Barnesiella, a number of clones, b sequence indentity, OTU # OTU No.