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Table 1 DNA fragments recovered from GD.EMSA and genes potentially regulated by ChvI

From: Members of the Sinorhizobium meliloti ChvI regulon identified by a DNA binding screen

Fragment Size Genomic origin Position Gene Function
  (bp) From To Inter/intra-genic   (location)
   Chromosome    
F1 129 60821 60949 intra SMc02574 (hisB) probable imidazoleglycerol-phosphate dehydratase
F2 304 654156 654459 intra SMc02281  
F3 595 1085493 1086087 intra SMc00051 (phaA2) probable Na(+)/H(+)-antiporter (upstream mucR)
F4 152 1183131 1183282 intra SMc02637 (upstream lpsL and rkpK)
F5 139 1220301 1220439 intra SMc00550 ABC transporter ATP-binding transmembrane protein (upstream psd and pssA)
F6 142 1260626 1260767 intra SMc00589 (upstream gal)
F7 145 1639710 1639854 intra SMc02076 (cls) putative cardiolipin synthetase transmembrane protein (downstream exoR; upstream xthA2)
F8 236 1830765 1831000 intra SMc00262 putative 3-ketoacyl-CoA thiolase
F9 166 2587012 2587177 intra SMc02733  
F10 256 2991422 2991677 intra SMc03993  
F11 128 3117150 3117277 intra SMc03159 (metN) methionine import ATP-binding protein
F12 288 3303566 3303853 intra SMc02491  
F13 184 3383057 3383240 inter SMc03267 putative dipeptidase (upstream ABC transporter)
F14 143 3412878 3413020 inter SMc03297  
   pSymB     
F15 184 1266 1449 inter & intra SMb21653 (lacF) lactose ABC transporter, permease component
F16 148 43628 43775 inter SMb20032  
F17 150 132970 133119 inter SMb20119 putative site-specific recombinase
F18 97 221089 221185 intra SMb20213 (upstream SMb20214)
F19 67 492546 492612 intra SMb20478 putative dipeptide ABC transporter permease and ATP-binding protein
F20 143 938297 938439 intra SMb21188 putative acyltransferase (msbA2 operon)
F21 141 1091213 1091353 intra & inter SMb21151 /SMb21552 (aacC4) putative aminoglycoside 6′-N-acetyltransferase
F22 221 1588216 1588436 intra SMb20574 putative maltodextrin α-D-glucosyltransferase
F23 145 1634582 1634726 intra SMb20615 (thiC) thiamine biosynthesis protein
   pSymA     
F24 220 1186198 1186417 intra SMa2103 oxidoreductase
F25 212 1278398 1278609 intra SMa2295 penicillin-binding protein
F26 94 1305222 1305315 intra SMa2337 (rhtX) rhizobactin transporter
F27 148 1305714 1305861 intra SMa2337 (rhtX) rhizobactin transporter