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Table 1 Clavibacter strains included in the study

From: Multilocus Variable-Number-Tandem-Repeats Analysis (MLVA) distinguishes a clonal complex of Clavibacter michiganensis subsp. michiganensisstrains isolated from recent outbreaks of bacterial wilt and canker in Belgium

Nr Strain nr 1 Name2 Host of isolation Cultivar Geographical3origin Year of isolation Alternative number MLVA group4
1 GBBC 283 Cmm Solanum lycopersicum - Belgium 2007 - G
2 GBBC 1082* Cmm Solanum lycopersicum Admiro Belgium 2011 - W
3 GBBC 1083* Cmm Solanum lycopersicum Admiro Belgium 2011 - W
4 GBBC 1086* Cmm Solanum lycopersicum - Belgium 2011 - W
5 GBBC 1389 Cmm Solanum lycopersicum - Belgium 2012 - W
6 GBBC 297* Cmm Solanum lycopersicum Growdena Belgium (Berlaar) 2010 - W
7 GBBC 310* Cmm Solanum lycopersicum Growdena Belgium (Berlaar) 2010 - W
8 GBBC 298* Cmm Solanum lycopersicum Admiro Belgium (Beveren) 2010 - W
9 PD 5734 Cmm Solanum lycopersicum Adelaide Belgium (Duffel) 1998 GBBC 178 = LMG 26621 E
10 GBBC 296* Cmm Solanum lycopersicum Growdena Belgium (Duffel) 2010 - W
11 GBBC 311* Cmm Solanum lycopersicum Growdena Belgium (Duffel) 2010 - W
12 GBBC 316* Cmm Solanum lycopersicum Growdena Belgium (Duffel) 2010 - W
13 GBBC 1060* Cmm Solanum lycopersicum Admiro Belgium (Duffel) 2010 - W
14 GBBC 282 Cmm Solanum lycopersicum Plaisance Belgium (Geel) 2007 PD 5741 = LMG 26626 U
15 GBBC 285 Cmm Solanum lycopersicum Admiro Belgium (Kontich) 2008 PD 5742 = LMG 26627 I
16 PD 1953 Cmm Solanum lycopersicum Dombito Belgium (Melsele) 1990 GBBC 100 = LMG 26622 G
17 GBBC 1604* Cmm Solanum lycopersicum Growdena Belgium (Melsele) 2010 - W
18 GBBC 301* Cmm Solanum lycopersicum Growdena Belgium (Melsele), ng 2010 - W
19 GBBC 300* Cmm Solanum lycopersicum Growdena Belgium (Melsele), og 2010 - W
20 GBBC 1064* Cmm Solanum lycopersicum Growdena Belgium (Putte) 2010 - W
21 GBBC 1606* Cmm Solanum lycopersicum Levanzo Belgium (Rijkevorsel) 2010 - W
22 PD 5737 Cmm Solanum lycopersicum Concreto 622 Belgium (Rumst) 1984 GBBC 103 = LMG 26624 J
23 PD 5733 Cmm Solanum lycopersicum Durinta Belgium (Rumst) 1996 GBBC 150 = LMG 26620 L
24 GBBC 1609* Cmm Solanum lycopersicum DRW 7749 Belgium (Rumst) 2010 - W
25 PD 5736 Cmm Solanum lycopersicum Rianto Belgium (St-Katelijne-Waver) 1983 GBBC 101 = LMG 26623 I
26 GBBC 312* Cmm Solanum lycopersicum Growdena Belgium (Waver) 2010 - W
27 GBBC 1061* Cmm Solanum lycopersicum Growdena Belgium (Waver) 2010 - W
28 GBBC 1605* Cmm Solanum lycopersicum Bigdena Belgium (Waver) 2010 - W
29 GBBC 303* Cmm Solanum lycopersicum DRW 7749 Belgium (Wervic) 2010 - W
30 GBBC 304* Cmm Solanum lycopersicum Bigdena Belgium (Wervic) 2010 - W
31 GBBC 308* Cmm Solanum lycopersicum DRW 7749 Belgium (Wervic) 2010 - W
32 PD 5753 Cmm Solanum lycopersicum - Algeria 1985 CFBP 2495 Q
33 LMG 5644 Cmm Solanum lycopersicum - Canada 1982 - O
34 Cl01TF02# Cmm Solanum lycopersicum - Canary Islands (Tenerife) 2003 - C
35 GBBC 1077 Cmm Solanum lycopersicum - France 2010 - W
36 GBBC 1078 Cmm Solanum lycopersicum - France 2010 - W
37 GBBC 1079 Cmm Solanum lycopersicum - France 2010 - P
38 GBBC 1080 Cmm Solanum lycopersicum - France 2010 - P
39 PD 5721 Cmm Solanum lycopersicum - France 2006 LMG 26819 S
40 PD 5719 Cmm Solanum lycopersicum - France 2008 - K
41 PD 5749 Cmm Solanum lycopersicum Admiro France 2007 GBBC 261 = LMG 26628 A
42 PD 4545 Cmm Solanum lycopersicum - Germany 2003 LMG 26617 D
43 LMG 7333 T Cmm Solanum lycopersicum - Hungary 1957 - R
44 PD 1386 Cmm Solanum lycopersicum - Italy 1961 NCPPB 1064 = LMG 3687 K
45 GBBC 242 Cmm Solanum lycopersicum Daniëlla Morocco 2003 PD 5750 = LMG 26629 M
46 LMG 5602 Cmm Cyphomandra betacea - New Zealand 1967 - X
47 PD 5699 Cmm Solanum lycopersicum - Portugal 1998 - N
48 LMG 3695 Cmm Solanum lycopersicum - Romania 1970 - F
49 PD 4149 Cmm Solanum lycopersicum - Slovenia 2001 LMG 26619 B
50 ES 2686.1# Cmm Solanum lycopersicum - Spain (Granada) 2002 - J
51 PD 1664 Cmm Solanum lycopersicum - Sweden - LMG 26805 R
52 PD 5722 Cmm Solanum lycopersicum - Switzerland 2007 - T
53 PD 1948 Cmm Solanum lycopersicum (seeds) - Taiwan 1988 PD 1683 = LMG 26625 G
54 GBBC 247 Cmm Solanum lycopersicum - The Netherlands (Velden) 2004 - H
55 LMG 3681 Cmm Solanum lycopersicum - United Kingdom 1956 NCPPB 382 V
56 PD 5751 Cmm Solanum lycopersicum - USA 1998 GBBC 172 = LMG 26630 O
57 LMG 26807 Clavibacter-like Solanum lycopersicum (seeds) - India 2000 PD 5683 na
58 LMG 26810 Clavibacter-like Solanum lycopersicum (seeds) - Chile 2007 PD 5686 na
59 LMG 3663T Cmi Medicago sativa - USA 1955 NCPPB 1109 na
60 LMG 5627T Cmn Zea mays - USA 1971 NCPPB 2581 = LMG 3700T na
61 LMG 7294T Cmt Triticum aestivum (Aestivum Group) - - 1978 ATCC 33566 na
62 LMG 2889T Cms Solanum tuberosum - Canada 1968 NCPPB 2137 na
  1. 1Bacterial collection abbreviations: LMG-BCCM/LMG-Bacterial Collection (Ghent, Belgium), PD-PD collection (Wageningen, The Netherlands) and GBBC-GBBC collection (ILVO, Merelbeke, Belgium).
  2. *Nursery BPK, Duffel, Belgium, # Instituto Canario de Investigaciones Agrarias (Tenerife, Spain), eight underlined strains were included in an initial testing of VNTR loci.
  3. 2Cmm-Clavibacter michiganensis subsp. michiganensis, Cmn-Clavibacter michiganensis subsp. nebraskensis, Cms-Clavibacter michiganensis subsp. sepedonicus, Cmi-Clavibacter michiganensis subsp. insidiosus, Cmt-Clavibacter michiganensis subsp. tessellarius.
  4. -Cultivar unknown; geographical origin unknown; year of isolation unknown; no alternative number.
  5. 3ng-new greenhouse, og-old greenhouse.
  6. 4na-not applicable.