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Table 1 PFAM functional enrichment

From: Gene expression in human fungal pathogen Coccidioides immitis changes as arthroconidia differentiate into spherules and mature

PFAM Term

# Specified Genes

Whole Genome

Specified Gene %

Whole Genome %

P Value

Corrected P Value

Day 2 Spherules Upregulated

      

Thioesterase superfamily (4HBT)

5

6

0.99

0.06

0.0

0.0010

Short chain dehydrogenase

11

57

2.19

0.58

0.0

0.04

Aldol-keto_reductase

6

13

1.19

0.13

0.0

0.0080

Day 8 Spherules Upregulated

      

MFS_1

14

140

3.85

1.43

0.0

0.131

Aldol-keto_reductase

5

13

1.37

0.13

0.0

0.018

Day 8 vs 2 Spherules Upregulated

      

C2

6

11

0.96

0.11

0.0

0.0090

PHD

8

16

1.29

0.16

0.0

0.0010

SH3_1

8

24

1.29

0.25

0.0

0.027

Pkinase

21

92

3.38

0.94

0.0

0.0

Day 2 Spherules Downregulated

      

PH

8

16

0.93

0.16

0.0

0.011

SH3_1

14

24

1.63

0.25

0.0

0.0

SH3_2

11

18

1.28

0.18

0.0

0.0

Pkinase

23

92

2.68

0.94

0.0

0.0010

zf-C2H2

19

53

2.21

0.54

0.0

0.0

Day 8 Spherules Downregulated

      

Kinesin

6

10

1.14

0.1

0.0

0.0020

Day 8 vs 2 Spherules Downregulated

      

None

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