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Table 2 Primers used in this study

From: The mxd operon in Shewanella oneidensis MR-1 is induced in response to starvation and regulated by ArcS/ArcA and BarA/UvrY

Primer

Sequence (5’-3’)

Pmxd-fw-SphI

TCTTGGCATGCCATTATTAAATGACC

Pmxd-rv-XbaI

TGTCATCTAGAAAACCTTGTACAGAT

LacZ-fw-XbaI

GGAATCTAGAATGACCATGATTACGGATT

LacZ-rv-PstI

AGAACTGCAGGCAAAAATAATACCCGTATC

Pmxd-fw-150-SphI

CGTACTACGCATGCGATTAAAGCGAGTTTTGATATTC

Pmxd-fw-250-SphI

CGTACTACGCATGCTTATTTTTATTTTGTTATTTTTTAATATTC

Pmxd-fw-300-SphI

CGTACTACGCATGCTTCAGGGTGAACAATTGTATC

Pmxd-fw-HindIII

GTACGTCAAAGCTTCATTATTAAATGACC

Pmxd-rv-XbaI

TGTCATCTAGAAAACCTTGTACAGAT

SO1860_uvrY_F-O

GCGAGCTAGAATAGGGCTAGGT

SO1860_uvrY_F-O

TCTTGCTGCTCTGCCACTC

SO1860_uvrY_5-O

CTCATTCTAAGCGCAGCTCCT

SO1860_uvrY_5-I

AACCCGTCGGAGGGATAATTGCATAACTGGCATATTCATGTCC

SO1860_uvrY_3-I

CAATTATCCCTCCGACGGGTTGAGAATCCGTTTAAAGCCTTATCTG

SO1860_uvrY_3-O

ACTGCAGCGGGATAACTGGTA

SO3457_barA_F-O

TTTATCATCGAGCAATTGGTAAACA

SO3457_barA_R-O

GAGTTCAAGGTAATAATTGACTAAACG

SO3457_barA_5-O

GTCGGCTGCAATCAACTCTAA

SO3457_barA_5-I

ATCTATACGCTCGCGGTGTTCATGTTGTTGACAGGGTTCATA

SO3457_barA_3-I

ACACCGCGAGCGTATAGATCTTTAAGCGTTTAAAAGCGCTAGAACTACCACA

SO3457_barA_3-O

CGCTGTTTGTTAAGATAAATCCTTG

SO3988_arcA_I_rv

AGTTACCACATACCCTTCTGCCTCG

SO3988_arcA_I_fw

TGAGTCATGTTGTCCATCGGTAGTC

SO3988_arcA_check_rv

GCGTTGCAGGACGAAGGCAAGTTG

SO3988_arcA_check_fw

CAACGGCGTTTGATAATGCTGCCAC

SO3988_arcA_II_rv

TCTAAGCATTCAATGCGTGG

SO3988_arcA_II_fw

GTGACTATCCGTCGTATCCGTAAGC