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Table 2 List of unigenes presenting statistically different representations in AO and SO libraries.

From: Host gene response to endosymbiont and pathogen in the cereal weevil Sitophilus oryzae

Accession numbers

1 R

Unigene length (pb)

2 Redundancy in AO

2 Redundancy in SO

3 1st blastx result on Tribolium Castaneum

3 Accession

3 e-value

3 Coverage

3 Max identity

4 InterProScan predicted domain

FQ866673

16.45

664

24

103

allergen aca S13 (cellular FABP-like)

XP_969762

6e-05

50%

32%

IPR011038; IPR012674

FQ866935, FQ867818

15.91

1307

304

440

NA

NA

NA

NA

NA

no IPR

FQ877624

5.21

723

21

0

NA

NA

NA

NA

NA

No IPR

FQ884311

3.22

351

13

0

RPL37

XP_969650

3e-36

76%

94%

IPR001569; IPR011331; IPR011332; IPR018267

FQ868370

2.9

525

17

1

Chemosensory protein 10

NP_001039278

6e-33

75%

49%

IPR005055

FQ862292

2.9

974

17

1

Cathepsin L-like proteinase

NP_001163996

2e-68

88%

48%

no IPR

FQ869260

2.73

138

11

0

NA

NA

NA

NA

NA

No IPR

FQ865010

2.49

865

12

28

Gamma-subunit. methylmalonyl-CoA decarboxylase

XP_973308

2e-24

54%

58%

IPR010625

FQ884611, FQ867701

2.48

1463

10

0

Myoinositol oxygenase

XP_966469

3e-133

6%

74%

IPR007828

FQ864415

2.17

704

0

6

Transmembrane protein 41B

XP_975236

1.8e-02

25%

42%

No IPR

FQ863216

2.17

812

0

6

NA

NA

NA

NA

NA

no IPR

  1. 1The R statistic test, with 500 random datasets, was performed to evaluate genes whose representation in AO and SO libraries was statistically different. Sequences showing an R statistic > 2 were significant.
  2. 2Unigene redundancy is given for each library (AO and SO).
  3. 3For each unigene, we gave blastx matches with Tribolium castaneum, the closest genome-sequenced insect, phylogenetically, to Sitophilus. Accession numbers of Tribolium related sequences, e-value of blastx hits, sequences coverage and max identity between Sitophilus and Tribolium sequences are also given.
  4. 4Interproscan predicted domains are given to complete the characterization of sequences.