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Table 2 Pan genomes of different Ureaplasma species sets

From: Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvumstrains

  All 19 strains 14 ATCC serovars U. urealyticum (14 strainsa) U. parvum (5 strainsb)
Pan genome 1020 971 938 688
Core genome 515 523 553 538
Singletons 262 246 216 77
Clusters of Orthologous Genes(COGs) 758 725 722 688
  1. Pan genome represents the number of clusters of orthologous genes and singletons. Singletons are genes found only in one of the genomes. Clusters of Orthologous Genes (COGs) have genes orthologous among at least 2 genomes.
  2. a) ATCC UUR2, UUR4, UUR5, UUR7-13, and the clinical isolates 2033, 2608, 4155, 4318.
  3. b) ATCC UPA1, UPA3 (ATCC 27815), UPA3 (ATCC 700970), UPA6, UPA14.