Table 1 Overview of Ureaplasma urealyticum and Ureaplasma parvum genomes
From: Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvumstrains
Serovar | ATCC | GenBankaccession | PFGE size (kbp) | Genome size (bp) | Contigs | ORFs | Hypothetical proteins | % GC | Sequence coverage |
|---|---|---|---|---|---|---|---|---|---|
1 | 27813 | NZ_ABES00000000 | 760 | 753,674 | 8 | 604 | 212 | 25% | 14.6X |
3 | 27815 | NC_010503 | 760 | 751,679 | 1 | 609 | 219 | 25% | 10.2X |
3 | 700970 | NC_002162 | Patient Isolate | 751,719 | 1 | 614 | 154 | 25% | - |
6 | 27818 | NZ_AAZQ00000000 | 760 | 772,971 | 5 | 619 | 221 | 25% | 11.4X |
14 | 33697 | NZ_ABER00000000 | 760 | 749,965 | 7 | 594 | 199 | 25% | 14.5X |
2 | 27814 | NZ_ABFL00000000 | 880 | 861,061 | 1 | 664 | 248 | 26% | 10.7X |
4 | 27816 | NZ_AAYO00000000 | 910 | 835,413 | 4 | 654 | 206 | 26% | 7.0X |
5 | 27817 | NZ_AAZR00000000 | 1140 | 884,046 | 18 | 677 | 252 | 26% | 8.5X |
7 | 27819 | NZ_AAYP00000000 | 880 | 875,530 | 4 | 660 | 246 | 26% | 8.3X |
8 | 27618 | NZ_AAYN00000000 | 890 | 874,381 | 1 | 673 | 232 | 26% | 9.9X |
9 | 33175 | NZ_AAYQ00000000 | 950 | 947,165 | 10 | 711 | 244 | 26% | 8.6X |
10 | 33699 | NC_011374 | 890 | 874,478 | 1 | 657 | 232 | 26% | 12.1X |
11 | 33695 | NZ_AAZS00000000 | 840 | 876,474 | 6 | 644 | 236 | 27% | 10.0X |
12 | 33696 | NZ_AAZT00000000 | 870 | 873,466 | 2 | 650 | 234 | 25% | 9.0X |
13 | 33698 | NZ_ABEV00000000 | 900 | 846,596 | 5 | 655 | 234 | 25% | 11.1X |
2033 | unknown serovar | AJFX00000000 | Patient Isolate | 804,560 | 16 | 646 | 190 | 26% | 39.0X |
2608 | unknown serovar | AJFY00000000 | Patient Isolate | 856,546 | 14 | 667 | 258 | 26% | 60.0X |
4155 | unknown serovar | AJFZ00000000 | Patient Isolate | 858,890 | 18 | 684 | 225 | 26% | 73.0X |
4318 | unknown serovar | AJGA00000000 | Patient Isolate | 844,630 | 16 | 662 | 214 | 26% | 52.0X |