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Table 1 Strains and Plasmids

From: RND type efflux pump system MexAB-OprM of pseudomonas aeruginosa selects bacterial languages, 3-oxo-acyl-homoserine lactones, for cell-to-cell communication

Strains/Plasmids

Characteristics

Reference

Strains

  

P. aeruginosa

  

PAO1

ATCC15692

[29]

KG4509

ΔmexB derivative of PAO1

This study

KG7004

ΔlasI ΔrhlI derivative of PAO1

This study

KG7050

ΔlasI ΔrhlI ΔmexB derivative of PAO1

This study

KG7403

gfp fused to the lasB promoter and integrated at the attB site of the KG7004 chromosome

This study

KG7503

gfp fused to the lasB promoter and integrated at the attB site of the KG7050 chromosome

This study

E. coli

  

DH5α

F-, Φ80d lacZ Δ M15, Δ(lacZYA- argF')U169, deoR, recA 1, endA 1, hsdR17(rk- mk+), phoA, supE 44, λ-, thi-1, gyrA 96, relA 1

[30]

S17-1

RE42-Tc: Mu-Km:: Tn7 pro res mod4

[31]

Plasmids

  

pUC18

Apr; high-copy-number cloning vector

[32]

pBR322

Apr Tcr; high-copy-number cloning vector

[33]

pSL1180

super-polylinker phagemid

[34]

pTO003

Gmr; E. coli-P. aeruginosa shuttle expression vector

[35]

pMT5059

Cbr; pBend2 derivative carrying multiple-cloning site and Not I site

[36]

pMT5071

Cmr; pMOB3 derivative carrying Ω-Cm instead of Cm

[37]

pAF2071

Cbr Cmr; pKT5059 carrying 2911-bp fragment with 3′ flanking region of rhlI including 91-bp of rhlI and 2110-bp fragment with 5′ flanking region of rhlI Mob cassette from pMT5071 at Not I

This study

plasI

Cbr Cmr; pMT5059 carrying 1.0-kb PCR fragments with 3′ and 5′ flanking regions of lasI and Mob cassette from pMT5071 at Not I

This study

pMexB

Cbr Cmr; pMT5059 carrying 1.0-kb PCR fragments with 3′ and 5′ flanking regions of mexB and Mob cassette from pMT5071 at Not I

This study

pKTA113

Gmr; subcloning of full length mexB in Xba I and Hin dIII site of pTO003

This study

pYT57

Phe136Ala mutation of mexB on pKTA113

This study

pYT81

Asp681Ala mutation of mexB on pKTA113

This study

pGreen

Apr; Enhanced GFP cassette plasmid

[38]

mini-CTX1

Tcr; self-profcient integration vector with tet, V-FRT-attP-MCS, ori, int, and oriT

[39]

pSG

Tcr; subcloning of gfp from pGreen

This study

pSQG003

Tcr; subcloning of a 598-bp lasB promoter region between Hin dIII and Kpn I sites of pSG

This study

pFLP2

Apr; source of Flp recombinase

[40]

pME6012

Tcr; pVS1-p15A shuttle vector

[41]

pMQG003

Tcr; subcloning of a 1781-bp lasB promoter::gfp region from pSQG003 in Bgl II site of pME6012

This study