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Table 5 Comparative sequence analysis of single cysts from Sweh207 at the bg locus

From: Allelic sequence heterozygosity in single Giardia parasites

Sub-assemblage Isolate

Material

GenBank acc no

Nucleotide position from start of gene

   

201

210

228

273

285

354*

537

BIII/BAH8

 

AY072727

C

C

A

A

T

C

C

BIV/Nij5

 

AY072725

C

T

A

A

T

T

C

Sweh207_65

Single cyst

JN579677

C

C

A

A

T

C

T

Sweh207_66

Single cyst

HM165209

C

T

A

A

T

C

C

Sweh207_133

  

C

T

A

A

T

C

C

Sweh207_103

  

C

T

A

A

T

C

C

Sweh207_105

Single cyst

AY072727

C

C

A

A

T

C

C

Sweh207_190

Single cyst

JN579678

C

C

A

G

T

C

C

Sweh207_61

Single cyst

JN579679

C

C

A

R

T

C

C

Sweh207_129

Single cyst

JN579680

C

T

R

A

T

C

C

Sweh207_106

Single cyst

JN579681

C

C

R

A

T

Y

C

Sweh207_107

Single cyst

JN579682

C

C

A

A

Y

C

C

Sweh207_181

  

C

C

A

A

Y

C

C

Sweh207_184

Single cyst

JN579683

C

Y

A

A

T

C

Y

Sweh207_186

Single cyst

JN579684

C

Y

A

R

T

C

C

Sweh207_183

Single cyst

JN579685

Y

C

A

R

T

Y

C

Sweh207_189

Single cyst

JN579686

Y

Y

R

R

T

Y

C

  1. * This nucleotide position is a substitution pattern proposed as a marker for different B sub-assemblages [10].