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Table 3 Comparative sequence analysis of single cysts from Sweh212 at the bg locus

From: Allelic sequence heterozygosity in single Giardia parasites

Sub-assemblageIsolate

Material

GenBank acc no

Nucleotide position from start of gene

   

354*

369

516

BIII/ BAH8

 

AY072727

C

C

T

BIV/ Nij5

 

AY072725

T

C

T

Sweh212

Crude stool isolate

JN579687

T

Y

Y

Sweh212_143

Single cyst

JN579688

T

Y

Y

Sweh212_145

  

T

Y

Y

Sweh212_136

Single cyst

HM165216

T

T

C

Sweh212_243

  

T

T

C

Sweh212_236

Single cyst

HM165214

T

C

T

Sweh212_242

  

T

C

T

  1. * This nucleotide position is a substitution pattern proposed as a marker for different B sub-assemblages [10].