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Table 1 Typing data and origin of Aeromonas strains analyzed in the study

From: Multilocus genetics to reconstruct aeromonad evolution

MLPA clade or isolated taxon

Strain

ST

CC (5)a

CC (4)b

Allelic profile

Origin

Infection (I) or colonization (C)

Region, country and year of isolation

     

dnaK

gltA

gyrB

radA

rpoB

tsf

zipA

   

A. hydrophila

(n=35)

BVH3

2

-

A

2

2

2

2

2

2

2

Human, Wound

I

Cahors, Fr, 2006

 

BVH14

7

-

A

7

2

7

7

2

2

2

Human, Wound

I

Le Mans, Fr, 2006

 

A. hydrophila subsp. hydrophila CCM 2278

7

-

A

7

2

7

7

2

2

2

Non-human,

Red-legged Frog

I

California, USA, 1963

 

BVH29

18

-

-

18

15

17

17

13

15

17

Human, Wound

I

Reunion Island, Fr, 2006

 

BVH30

18

-

-

18

15

17

17

13

15

17

Human, Stool

I

Langres, Fr, 2006

 

BVH35

23

-

-

23

19

21

22

18

12

20

Human, Wound

C

La Roche sur Yon, Fr, 2006

 

BVH99

23

-

-

23

19

21

22

18

12

20

Human, NA

ND

Brest, Fr, ND

 

BVH25a

15

-

-

15

13

14

14

10

13

14

Human, Respiratory tract

I

Saint-Brieux, Fr,2006

 

BVH27b

15

-

-

15

13

14

14

10

13

14

Human, Wound

I

Reunion Island, Fr, 2006

 

AK204

15

-

-

15

13

14

14

10

13

14

Non-human, Snail

I

Angers, Fr, 1995

 

BVH2

1

-

-

1

1

1

1

1

1

1

Human, Wound

I

Cahors, Fr, 2006

 

BVH12

5

-

-

5

5

5

5

5

5

5

Human, Eyes infection

I

Cherbourg, Fr, 2006

 

BVH24

14

-

-

14

12

13

13

9

12

13

Human, Wound

I

Saint-Brieux, Fr,2006

 

BVH33

21

-

-

21

18

20

20

16

2

20

Human, Wound

I

La Rochelle, Fr, 2006

 

BVH34

22

-

-

22

15

17

21

17

18

21

Human, Urine

C

La Roche sur Yon, Fr, 2006

 

BVH36

24

-

-

24

20

22

23

19

5

22

Human, Wound

I

La Roche sur Yon, Fr, 2006

 

BVH41

28

-

-

28

24

26

27

23

22

26

Human, Wound

I

Vannes, Fr, 2006

 

BVH42

29

-

-

29

25

27

28

24

12

27

Human, Wound

I

Périgueux, Fr, 2006

 

BVH45

32

-

-

32

28

30

14

10

25

30

Human, Wound

I

Périgueux, Fr, 2006

 

BVH64

48

-

-

47

15

44

42

35

35

42

Human, Wound

I

Belfort, Fr, 2006

 

BVH72

55

-

-

52

42

49

48

39

12

46

Human, Blood

ND

Martinique Island, Fr, ND

 

BVH75

57

-

-

53

44

51

49

2

12

48

Human, Respiratory tract

I

Saint-Etienne, Fr,2006

 

BVH93

68

-

-

63

52

60

57

47

45

14

Human, Wound

I

Cahors, Fr, 2006

 

BVH96

70

-

-

65

54

62

59

48

47

56

Human, Wound

C

Bourg en Bresse, Fr, 2006

 

BVH97

71

-

-

66

55

63

1

49

48

57

Human, Wound

I

Bourg en Bresse, Fr, 2006

 

ADV105

76

-

-

69

58

67

63

51

49

60

Human, Stool

ND

Montpellier, Fr, 2008

 

AK203

93

-

-

86

70

81

76

60

61

14

Non-human, Snail

I

Angers, Fr, 1995

 

AK218

95

-

-

88

72

83

78

47

49

74

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK235

105

-

-

97

79

93

88

66

67

81

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

A. hydrophila subsp. hydrophila CECT 839T

130

-

-

120

102

114

108

79

81

22

Environment, Tin of milk with a fishy odor

-

NA, NA, NA

 

A. hydrophila subsp. ranae CIP 107985

131

-

-

121

103

115

109

80

82

101

Non-human, Frog

I

NA, Thaïland, NA

 

A. hydrophila CECT 5734

163

-

-

150

132

144

137

104

12

127

Non-human, Fish

I

Valencia, Spain, 1987

 

A. hydrophila subsp. hydrophila CCM 2280

171

-

-

69

139

152

145

111

115

134

Non-human, Snake

-

NA, NA, 1963

 

A. hydrophila subsp. hydrophila CCM 2282

172

-

-

158

140

153

146

47

116

135

Non-human, Nile Monitor

ND

NA, NA, 1963

 

A. hydrophila subsp. hydrophila CCM 4528

174

-

-

160

15

17

148

13

118

137

Human, Stool

ND

NA, Czech Republic, 1993

A. veronii

(n=71)

BVH22

13

-

-

13

11

12

4

8

11

12

Human, Wound

I

Alès, Fr, 2006

 

BVH23

13

-

-

13

11

12

4

8

11

12

Human, Wound

I

Saint-Brieux, Fr,2006

 

BVH25b

13

-

-

13

11

12

4

8

11

12

Human, Respiratory tract

I

Saint-Brieux, Fr,2006

 

BVH26a

13

-

-

13

11

12

4

8

11

12

Human, Wound

I

Saint-Brieux, Fr,2006

 

BVH27a

13

-

-

13

11

12

4

8

11

12

Human, Wound

I

Reunion Island, Fr,2006

 

BVH28a

13

-

-

13

11

12

4

8

11

12

Human, Wound

I

Reunion Island, Fr,2006

 

BVH61

46

5

D

46

29

31

31

34

34

40

Human, Stool

I

Antibes, Fr,2006

 

BVH71

54

5

D

46

29

31

31

26

34

40

Human, Stool

ND

Martinique Island, Fr, ND

 

BVH47

33

-

D

33

29

31

31

26

16

31

Human, Blood

I

Roubaix, Fr,2006

 

ADV102

33

-

D

33

29

31

31

26

16

31

Human, Stool

ND

Montpellier, Fr, 2008

 

BVH18

10

-

-

10

9

10

10

7

9

9

Human, Wound

I

Villeneuve sur Lot, Fr, 2006

 

AK249

10

-

-

10

9

10

10

7

9

9

Environment,

Water lake

 

Annecy, Fr, 1998

 

ADV129

85

8

H

78

64

74

69

56

56

67

Human, Stool

ND

Montpellier, Fr, 2009

 

ADV133

89

8

H

82

64

74

69

56

56

67

Human, Wound

I

Montpellier, Fr, 2010

 

BVH 90

66

7

G

61

6

58

55

45

43

53

Human, Stool

I

Dunkerque, Fr, 2006

 

AK236

106

7

G

61

6

58

55

45

68

53

Environment, Water lake

-

Annecy, Fr, 1998

 

BVH37

25

-

-

25

21

23

24

20

19

23

Human, Blood

I

La Roche sur Yon, Fr, 2006

 

BVH46

25

-

-

25

21

23

24

20

19

23

Human, Blood

I

Roubaix, Fr, 2006

 

BVH56

42

4

E

42

36

40

24

32

6

23

Human, Blood

I

Versailles, Fr, 2006

 

ADV101

74

4

E

42

57

40

24

32

19

23

Human, Stool

ND

Montpellier, Fr, 2008

 

A. veronii bv. veronii CECT 4257T

143

-

-

131

114

125

120

11

19

110

Human, Respiratory tract

I

Michigan, USA, NA

 

A. veronii CCM 4360

143

-

-

131

114

125

120

11

19

110

Human, Stool

I

Connecticut, USA, 1984

 

BVH6

4

-

-

4

4

4

4

4

4

4

Human, Wound

I

Cahors, Fr, 2006

 

BVH13

6

-

-

6

6

6

6

4

6

6

Human, Blood

I

Le Mans, Fr, 2006

 

BVH26b

16

-

-

16

11

15

15

11

6

15

Human, Wound

I

Saint-Brieux, Fr,2006

 

BVH31

19

-

-

19

16

18

18

14

16

18

Human, Bile

I

La Rochelle, Fr, 2006

 

BVH32

20

-

-

20

17

19

19

15

17

19

Human, Stool

C

La Rochelle, Fr, 2006

 

BVH44

31

-

-

31

27

29

30

20

24

29

Human, Wound

I

Périgueux, Fr, 2006

 

BVH49

35

-

-

35

30

33

33

20

27

33

Human, Stool

I

Chalon sur Saone, Fr, 2006

 

BVH50

36

-

-

36

31

34

34

28

6

34

Human, Respiratory tract

I

Chalon sur Saone, Fr, 2006

 

BVH53

39

-

-

39

34

37

37

31

30

29

Human, Blood

I

Saint Denis, Fr, 2006

 

BVH54

40

-

-

40

35

38

38

4

31

37

Human, Respiratory tract

I

Saint Denis, Fr, 2006

 

BVH59

44

-

-

44

37

41

39

33

19

38

Human, Blood

I

Le Havre, Fr, 2006

 

BVH60

45

-

-

45

38

42

40

20

33

39

Human, Stool

I

Antibes, Fr, 2006

 

BVH73

56

-

-

39

43

50

37

40

38

47

Human, Blood

ND

Martinique Island, Fr, NA

 

BVH77

58

-

-

54

45

52

50

41

19

49

Human, Stool

C

Aix en Provence, Fr, 2006

 

BVH79

59

-

-

55

46

53

51

4

19

37

Human, Wound

I

Aix en Provence, Fr, 2006

 

BVH80

60

-

-

56

47

54

52

42

39

50

Human, Stool

I

Aix en Provence, Fr, 2006

 

BVH95

69

-

-

64

53

61

58

20

46

55

Human, Wound

I

Bourg en Bresse, Fr, 2006

 

ADV103

75

-

-

68

29

66

62

26

34

59

Human, Stool

ND

Montpellier, Fr, 2008

 

ADV109

78

-

-

71

60

69

65

53

51

61

Human, Stool

ND

Montpellier, Fr, 2008

 

ADV119

80

-

-

73

61

70

66

53

52

62

Human, Stool

ND

Montpellier, Fr, 2009

 

ADV125

83

-

-

76

63

72

68

54

54

65

Human, Stool

ND

Montpellier, Fr, 2009

 

ADV127

84

-

-

77

11

73

68

55

55

66

Human, Stool

ND

Montpellier, Fr, 2009

 

ADV130

86

-

-

79

11

75

70

33

17

68

Human, Blood

ND

Montpellier, Fr, 2010

 

ADV131

87

-

-

80

65

76

71

11

19

69

Human, Respiratory tract

ND

Montpellier, Fr, 2009

 

ADV135

90

-

-

83

67

78

73

57

58

23

Human, Stool

ND

Montpellier, Fr, 2010

 

ADV137b

91

-

-

84

68

79

74

58

59

71

Human, Respiratory tract

ND

Montpellier, Fr, 2010

 

AK219

96

-

-

89

27

84

79

11

62

75

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK222

97

-

-

90

73

85

80

62

19

76

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK226

99

-

-

92

75

87

82

8

63

12

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK227

100

-

-

93

76

88

83

34

64

29

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK232

103

-

-

95

11

91

86

64

65

79

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK237

107

-

-

98

80

94

51

67

19

82

Environment, Water lake

-

Annecy, Fr, 1998

 

AK238

108

-

-

99

81

95

89

34

69

83

Environment, Water lake

-

Annecy, Fr, 1998

 

AK239

109

-

-

100

82

73

68

55

6

84

Environment, Water lake

-

Annecy, Fr, 1998

 

AK240

110

-

-

101

83

96

90

20

19

85

Environment, Water lake

-

Annecy, Fr, 1998

 

AK241

111

-

-

102

84

97

91

20

56

86

Non-human, Snail

I

Angers, Fr, 1995

 

AK242

112

-

-

25

85

98

92

68

19

23

Environment, Water lake

-

Annecy, Fr, 1998

 

AK243

113

-

-

103

86

98

93

20

70

87

Non-human, Snail

I

Angers, Fr, 1995

 

AK244

114

-

-

104

87

99

94

69

19

23

Environment, Water lake

-

Annecy, Fr, 1998

 

AK246

116

-

-

106

89

101

95

71

19

12

Non-human, Snail

I

Angers, Fr, 1995

 

AK247

117

-

-

107

90

102

96

58

72

89

Environment, Water lake

-

Annecy, Fr, 1998

 

AK248

118

-

-

108

91

103

97

34

73

90

Environment, Water lake

-

Annecy, Fr, 1998

 

AK250

119

-

-

109

27

83

98

11

19

75

Environment, Water lake

-

Annecy, Fr, 1998

 

AK251

120

-

-

110

92

104

99

20

19

91

Environment, Water lake

-

Annecy, Fr, 1998

 

A. culicicola CIP 107763 T

124

-

-

114

96

108

4

33

77

95

Non-human, Mosquito midgut

ND

Pune, India, 1997

 

A. ichthiosmia CECT 4486T

132

-

-

122

104

116

110

81

19

102

Environment, Surface water

-

NA, Germany, 1986

 

A. veronii bv. sobria LMG 13067

144

-

-

132

115

126

121

8

93

12

Non-human, Frog

I

Connecticut, USA, NA

 

A. veronii CECT 4902

161

-

-

148

131

143

136

103

108

126

Environment, NA

-

NA, Germany, 1993

 

A. veronii CECT 7059

164

-

-

151

133

145

138

33

109

39

Environment, Drinking water

-

Zaragoza, Spain, 2002

A. caviae

(n=34)

BVH16

9

1

B

9

8

9

9

3

8

8

Human, Respiratory tract

C

Rambouillet, Fr, 2006

 

BVH57

43

1

B

43

8

9

9

3

32

8

Human, Blood

I

Versailles, Fr, 2006

 

BVH63

47

6

F

12

10

43

41

3

10

41

Human, Blood

I

Macon, Fr, 2006

 

BVH84

47

6

F

12

10

43

41

3

10

41

Human, Stool

I

Aix en Provence, Fr, 2006

 

BVH98

72

-

F

12

10

64

60

37

10

41

Human, Wound

I

Brest, Fr, NA

 

ADV118

79

6

F

72

10

43

8

3

10

41

Human, Wound

I

Montpellier, Fr, 2009

 

ADV121

81

-

F

74

10

43

8

3

3

63

Human, Stool

ND

Montpellier, Fr, 2009

 

BVH48

34

2

C

34

10

32

32

27

26

32

Human, Vagina

C

Monceau les mines, Fr, 2006

 

A. caviae CCUG 48892

175

2

C

34

10

32

32

27

3

32

Environment,

Water

 

Uppsala, Sweden, 2004

 

BVH19

11

-

C

11

10

3

11

3

10

10

Human, Vagina

C

Villeneuve sur Lot, Fr, 2006

 

BVH81

61

-

C

34

10

3

11

3

26

32

Human, Stool

C

Aix en Provence, Fr, 2006

 

BVH66

50

-

C

34

10

46

44

37

26

32

Human, Wound

I

Martinique Island, Fr, 2006

 

BVH55

41

3

C

41

10

39

12

3

26

32

Human, Stool

I

Saint-Denis, Fr, 2006

 

BVH87

64

3

C

59

10

39

12

3

26

32

Human, Stool

I

Aix en Provence, Fr, 2006

 

BVH4

3

-

-

3

3

3

3

3

3

3

Human, Wound

I

Cahors, Fr, 2006

 

BVH15

8

-

-

8

7

8

8

6

7

7

Human, Blood

I

Grasse, Fr, 2006

 

BVH20

12

-

-

12

10

11

12

3

8

11

Human, Stool

I

Gonesse, Fr, 2006

 

BVH51

37

-

-

37

32

35

35

29

28

35

Human, Blood

I

Monaco, Fr, 2006

 

BVH52

38

-

-

38

33

36

36

30

29

36

Human, Blood

I

Monaco, Fr, 2006

 

BVH67

51

-

-

49

32

47

45

3

8

35

Human, Stool

ND

Martinique Island, Fr, NA

 

BVH85

62

-

-

57

48

55

11

3

40

8

Human, Stool

I

Aix en Provence, Fr, 2006

 

BVH86

63

-

-

58

49

56

53

43

41

51

Human, Stool

C

Aix en Provence, Fr, 2006

 

BVH100

73

-

-

67

56

65

61

50

26

58

Human, Wound

ND

Brest, Fr, ND

 

ADV106

77

-

-

70

59

68

64

52

50

35

Human, Stool

ND

Montpellier, Fr, 2008

 

ADV124

82

-

-

75

62

71

67

3

53

64

Human, Stool

ND

Montpellier, Fr, 2009

 

AK223

98

-

-

91

74

86

81

3

8

77

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK229

101

-

-

34

77

89

84

37

3

78

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK231

102

-

-

94

78

90

85

63

26

32

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK234

104

-

-

96

10

92

87

65

66

80

Environment, Waste water treatment lagoon

-

Montracol, Fr, 2006

 

AK245

115

-

-

105

88

100

11

70

71

88

Environment, Water lake

-

Annecy, Fr, 1998

 

A. caviae CECT 838 T

123

-

-

113

95

107

102

74

76

94

Non-human, Guinea pig

I

NA, USA, NA

 

A. hydrophila subsp. anaerogenes CECT 4221

128

-

-

118

100

112

106

50

3

99

Environment, Used oil emulsion

-

NA, USA, NA

 

A. caviae CECT 4222

154

-

-

142

78

136

131

37

103

35

Environment, Sewage

-

NA, NA, 1954

 

A. caviae CECT 4226

155

-

-

118

125

137

11

50

3

120

Environment, Used oil emulsion

-

NA, USA, 1953

A. piscicola

(n=3)

A. piscicola LMG 24783T

151

  

139

122

133

128

95

100

117

Non-human, Salmon

I

Gallicia, Spain, 2005

 

A. sobria CECT 4333

156

9

J

143

126

138

132

98

104

121

Non-human, Diseased elver

I

Valencia, Spain, NA

 

Aeromonas sp. CECT 5177

162

9

J

149

126

138

132

98

104

121

Environment, Drinking water

-

Eeklo, Belgium, 1996

A. salmonicida

(n=8)

A. salmonicida subsp. achromogenes CIP 104001

136

-

I

126

107

120

114

85

86

94

Non human, Trout

ND

Aberdeen, UK, 1963

 

A. salmonicida subsp. masoucida CIP 103210

137

-

I

126

108

120

115

85

87

105

Non human, Fish blood

I

NA, NA, 1969

 

A. salmonicida subsp. smithia CIP 104757

137

-

I

126

108

120

115

85

87

105

Non human, Fish ulcer

I

NA, UK, NA

 

A. salmonicida subsp. salmonicida CIP 103209T

139

-

I

126

110

120

114

85

89

105

Non human, Diseased salmon

I

Cletter river, UK, 1953

 

BVH39

26

-

-

26

22

24

25

21

20

24

Human, Wound

C

Vannes, Fr, 2006

 

A. salmonicida subsp. pectinolytica CIP 107036

138

-

-

127

109

121

116

86

88

106

Environment,

River water

 

Buenos Aires, Argentina, NA

 

A. salmonicida CCM 1150

168

-

-

155

136

149

142

108

112

131

Non human,

Fish

ND

NA, Czech Republic, 1961

 

A. salmonicida CCM 1275

170

-

-

157

138

151

144

110

114

133

Fish

ND

NA, Czech Republic, 1961

A. allosaccharophila

(n=3)

BVH88

65

-

-

60

50

57

54

44

42

52

Human, Blood

I

Dunkerque, Fr, 2006

 

A. allosaccharophila CECT 4199T

121

-

-

111

93

105

100

72

74

92

Non-human, Fish

I

Valencia, Spain, 1991

 

A. sobria CECT 4053

153

-

-

141

124

135

130

97

102

119

Environment,

Activated sludge

 

Stockholm, Sweden, 1978

A. sobria

(n=5)

A. sobria CECT 4245T

141

-

-

129

112

123

118

88

91

108

Non-human, Fish

ND

NA, Fr, 1974

 

Aeromonas sp. CECT 4816

157

-

-

144

127

139

133

99

105

122

Non-human, Fish

ND

NA, NA, 1993

 

Aeromonas sp. CECT 4817

158

-

-

145

128

140

134

100

106

123

Non-human, Fish

ND

NA, NA, 1993

 

Aeromonas sp. CECT 4818

159

-

-

146

129

141

135

101

107

124

Non-human, Fish

ND

NA, NA, 1993

 

A. sobria CECT 4821

160

-

-

147

130

142

118

102

91

125

Non-human, Fish

ND

NA, NA, 1993

A. aquariorum

(n=8)

BVH28b

17

-

-

17

14

16

16

12

14

16

Human, Wound

I

Reunion Island, Fr, 2006

 

BVH43

30

-

-

30

26

28

29

25

23

28

Human, Wound

I

Périgueux, Fr, 2006

 

BVH65

49

-

-

48

39

45

43

36

36

43

Human, Blood

I

Martinique Island, Fr, 2006

 

BVH68

52

-

-

50

40

48

46

12

23

44

Human, NA

ND

Martinique Island, Fr, ND

 

BVH70

53

-

-

51

41

28

47

38

37

45

Human, NA

ND

Martinique Island, Fr, ND

 

ADV132

88

-

-

81

66

77

72

25

57

70

Human, Wound

I

Montpellier, Fr, 2010

 

A. hydrophila subsp. dhakensis CIP 107500

129

-

-

119

101

113

107

78

23

100

Human, Stool

I

NA, Bangladesh, NA

 

A. aquariorum CECT 7289T

145

-

-

133

116

127

122

89

94

111

Non-human, Fish

ND

NA, Portugal, 2003

A. media

(n=6)

BVH40

27

-

-

27

23

25

26

22

21

25

Human, Stool

C

Vannes, Fr, 2006

 

AK202

92

-

-

85

69

80

75

59

60

72

Non-human, Snail

I

Angers, Fr, 1995

 

AK211

94

-

-

87

71

82

77

61

60

73

Non-human, Snail

I

Angers, Fr, 1995

 

A. media CECT 4232 T

134

-

-

124

71

118

112

83

84

97

Environment, Fish farm effluent water

-

NA, UK, NA

 

Aeromonas sp. CECT 7111

167

-

-

154

71

148

141

107

60

130

Non-human, Oyster

-

Barcelona, Spain, NA

 

A. media CCM 4242

173

-

-

159

141

154

147

59

117

136

Environment, River water

-

NA, Czech Republic, 1991

A. tecta

(n=3)

A. tecta CECT 7082T

146

-

-

134

117

128

123

90

95

112

Human, Stool

ND

Ticino, Switzerland, NA

 

Aeromonas sp. CECT 7081

165

-

-

152

134

146

139

105

110

128

Non-human, Fish

ND

Ticino, Switzerland, 1983

 

Aeromonas sp. CECT 7083

166

-

-

153

135

147

140

106

111

129

Environment, Tap water

-

Ticino, Switzerland, 1993

A. jandaei

BVH92

67

-

-

62

51

59

56

46

44

54

Human, Urine

I

Toulouse, Fr, 2006

(n=2)

A. jandaei CECT 4228T

133

-

-

123

105

117

111

82

83

103

Human, Stool

ND

Oregon, USA, 1980

A. enteropelogenes

A. enteropelogenes CECT 4487 T

126

-

-

116

98

110

104

76

79

97

Human, Stool

ND

NA, India, NA

A. trota

A. trota CECT 4255 T

142

-

-

130

113

124

119

76

92

109

Human, Stool

ND

Varasani, India, NA

A. bestiarum

A. bestiarum CECT 4227T

122

-

-

112

94

106

101

73

75

93

Non-human, Fish

ND

NA, Fr, 1974

A. encheleia

A. encheleia CECT 4342T

125

-

-

115

97

109

103

75

78

96

Non-human, Fish

I

Valencia, Spain, 1987

HG11

HG11 CECT 4253

147

-

-

135

118

129

124

91

96

113

Human, Wound

I

New Zealand, 1983

A. eucrenophila

A. eucrenophila CECT 4224T

127

-

-

117

99

111

105

77

80

98

Non-human, Freshwater fish

ND

NA, NA, NA

A. fluvialis

A. fluvialis LMG 24681 T

149

-

-

137

120

131

126

93

98

115

Environmental, River water

-

Girona, Spain, NA

A. popoffii

A. popoffi CIP 105493T

135

-

-

125

106

119

113

84

85

104

Environmental, Water

-

Oelegem, Belgium, 1993

A. sanarellii

A. sanarellii LMG 24682T

152

-

-

140

123

134

129

96

101

118

Human, Wound

I

NA, Taïwan, 2000

A. schubertii

A. schubertii CECT 4240T

140

-

-

128

111

122

117

87

90

107

Human, Wound

I

Texas, USA, 1981

A. diversa

HG13 CECT 4254T

148

-

-

136

119

130

125

92

97

114

Human, Wound

I

Louisiana, USA, NA

A. taiwanensis

A. taiwanensis LMG 24683T

150

-

-

138

121

132

127

94

99

116

Human, Wound

I

NA, Taïwan, 2000

Unknown taxon

A. bestiarum CCM 1271

169

-

-

156

137

150

143

109

113

132

Non-human, Gold fish

ND

NA, NA, NA

A. bivalvium

A. bivalvium CECT 7113T

-

-

-

161

142

155

-

112

119

138

Non-human, Cockles

-

Barcelona, Spain, 1997

A. molluscorum

A. molluscorum CIP 108876T

-

-

-

-

143

156

-

113

120

139

Non-human, Wedge-shells

-

Barcelona, Spain, 1997

A. simiae

A. simiae CIP 107798T

-

-

-

162

144

157

-

114

121

140

Non-human, Healthy monkey

-

NA, Mauritus, 1999

A. rivuli

A. rivuli DSM 22539T

-

-

-

-

145

158

149

115

122

141

Environment, Karst hardwater creek

-

Westerhöfer Bach, Germany, NA

  1. For each strain, the table presents the results of the multilocus phylogenetic analysis (MLPA); the result of the multilocus sequence analysis (strain ST number and belonging to a clonal complex); the allelic number for each of the 7 genes; and the characteristics of strain isolation (origin, colonizing or infecting status, spatio-temporal origin).
  2. aCC(5): clonal complex defined by at least 5 identical alleles.
  3. bCC(4): clonal complex defined by at least 4 identical alleles.
  4. ND: not determined; NA: not available; -: not applicable.
  5. Names of strains and alleles concerned by recombination detected by phylogenetic incongruities are in bold type.
  6. All bacteremia originated from the gut [17].