Skip to main content

Table 1 Gene expression differences of C. glutamicum WT in response to biotin limitation, biotin excess or supplementation with dethiobiotin

From: Characterization of the biotin uptake system encoded by the biotin-inducible bioYMN operon of Corynebacterium glutamicum

Genea

Annotationa

Relative mRNA level

  

1 μg/l biotin

20000 μg/l biotin

dethiobiotin b

  

200 μg/l biotin

200 μg/l biotin

biotinb

cg0095

biotin synthase BioB

6.8

0.1

11.3

cg0096

hypothetical protein

5.5

0.2

3.6

cg0097

hypothetical protein

10.1

0.1

3.5

cg0126

hypothetical protein

0.5

n.d.

2.1

cg0486

ABC-type transporter. permease component

n.d.

0.5

n.d.

cg0634

ribosomal protein L15 RplO

0.4

n.d.

n.d.

cg1141

lactam utilization protein

n.d.

0.5

1.2

cg1142

transport system

2.1

0.4

1.2

cg1214

cysteine desulfhydrase/selenocysteine lyase NadS

1.9

0.5

1.3

cg1216

quinolate synthase A NadA

1.9

0.5

1.4

cg1218

ADP-ribose pyrophosphatase NdnR

2.1

0.4

2.0

cg1671

hypothetical protein

n.d.

2.0

0.3

cg2147

Biotin transport protein BioY

18.8

0.1

4.4

cg2148

Biotin transport protein BioM

4.9

0.2

2.6

cg2149

Biotin transport protein BioN

2.0

0.4

1.6

cg2320

predicted transcriptional regulator MarR family

2.0

0.5

1.6

cg2560

isocitrate lyase AceA

3.1

0.4

1.0

cg2747

metalloendopeptidases-like protein

n.d.

0.4

2.3

cg2883

SAM-dependent methyltransferase

2.2

0.2

n.d.

cg2884

putative dipeptide/tripeptide permease

8.9

0.1

5.6

cg2885

adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA

3.8

0.1

n.d.

cg3231

hypothetical protein

0.5

n.d.

n.d.

cg3289

thiol:disulfide interchange protein TlpA

0.4

n.d.

n.d.

  1. aGene numbers and annotations of the revised C. glutamicum genome published by NCBI as NC003450
  2. bRatio of the mRNA level in cells grown in CGXII with 200 μg/l dethiobiotin to that of cells grown with 200 μg/l biotin