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Table 1 Primers employed for Real-Time PCR

From: Impact of antibiotic treatments on the expression of the R plasmid tra genes and on the host innate immune activity during pRAS1 bearing Aeromonas hydrophila infection in zebrafish (Danio rerio)

Target gene

Sequence (5' to 3')

Reference or GenBank

accession no.

E. coli 16S rDNA

F

GCAGGCCTAACACATGCAAGTC

[30]

 

R

TGCTGCCTCCCGTAGGAGT

 

traD

F

ACGCCTCCTGTTCTGTTTCA

[DQ401103.1]

 

R

ATCAGCCCGGTCAGATTGT

 

virB11

F

GGATCAACTCAGCCACAAAAA

[DQ401103.1]

 

R

CACCGTTCCGCTGTTCTATT

 

virD4

F

GTTGTCCAGGGTAGCAGCAG

[DQ401103.1]

 

R

TGGACAACCAGGAACAAGC

 

dfr16

F

GACCTCATCCTCCGATGG

[AJ517790.2]

 

R

TGGTCGGAGATATGGGTATAGAA

 

C3

F

CGGACGCTGACATCTACCAA

[25]

 

R

TCCAGGTCTGCTCTCCCAAG

 

IL-1β

F

ATCAAACCCCAATCCACAGAGT

[25]

 

R

GGCACTGAAGACACCACGTT

 

IL-8

F

TGTTTTCCTGGCATTTCTGACC

[24]

 

R

TTTACAGTGTGGGCTTGGAGGG

 

TNF α

F

ACCAGGCCTTTTCTTCAGGT

[10]

 

R

TGCCCAGTCTGTCTCCTTCT

 

ef1α

F

TGCCTTCGTCCCAATTTCAG

[24]

 

R

TACCCTCCTTGCGCTCAATC

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