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Table 1 GpsX/XAC3110 homologues in Xanthomonas spp

From: The gpsX gene encoding a glycosyltransferase is important for polysaccharide production and required for full virulence in Xanthomonas citri subsp. citri

Strains a

 

Homologue

  
 

Gene/locus_tag

Putative product

Size (aa)

Domain structure b

Identity (%) c

Xac 306

gpsX/XAC3110

glycosyltransferase

675

Glycos_transf_2 (1); SCOP:d1f6da_(1)

 

Xpe 91-118

XPE_2818

glycosyltransferase

700

Glycos_transf_2 (1); SCOP:d1f6da_(1)

97

Xoo KACC10331

XOO1738

glycosyltransferase

675

Glycos_transf_2 (1); Glycos_transf_1(1);

94

Xoo MAFF311018

XOO_1639

glycosyltransferase

700

Glycos_transf_2 (1);

94

Xoo PXO99A

PXO_01594

glycosyltransferase

700

Glycos_transf_2 (1)

94

Xoc BLS256

Xoryp_010100016275

glycosyltransferase

700

Glycos_transf_2 (1); Glycos_transf_1(1);

94

Xcv NCPPB702

XcampvN_010100002613

glycosyltransferase

698

Glycos_transf_2 (1); Glycos_transf_1(1);

94

Xau ICPB10535

XAUC_30140

glycosyltransferase

694

Glycos_transf_2 (1); Glycos_transf_1(1);

93

Xau ICPB11122

XAUB_29140

glycosyltransferase

694

Glycos_transf_2 (1); SCOP:d1f6da_(1)

93

Xve ATCC35937

XVE_0383

glycosyltransferase

701

Glycos_transf_2 (1); SCOP:d1f6da_(1)

93

Xcv 85-10

XCV3242

glycosyltransferase

694

Glycos_transf_2 (1); SCOP:d1f6da_(1)

92

Xga ATCC19865

XGA_4540

glycosyltransferase

700

Glycos_transf_2 (1); SCOP:d1f6da_(1)

92

Xcc 8004

XC_1175

glycosyltransferase

675

Glycos_transf_2 (1); Glycos_transf_1(1);

90

Xcc ATCC33913

XCC2933

glycosyltransferase

700

Glycos_transf_2 (1); Glycos_transf_1(1);

89

Xcc B100

xccb100_1219

hypothetical protein

700

Glycos_transf_2 (1); SCOP:d1f6da_(1)

89

Xcr 756C

XCR_3304

glycosyltransferase

700

Glycos_transf_2 (1); SCOP:d1f6da_(1)

89

Xan GPE PC73

XALc_2250

glycosyltransferase

698

Glycos_transf_2 (1); Glycos_transf_1(1);

70

  1. a Xac 306: X. axonopodis pv. citri strain 306 (GenBank accession number: AE008923); Xpe 91-118: X. perforans 91-118 (AEQW00000000); Xoo KACC10331: X. oryzae pv. oryzae KACC10331 (AE0135983); Xoo MAFF311018: X. oryzae pv. oryzae MAFF311018 (AP008229); Xoo PXO99A: X. oryzae pv. oryzae PXO99A (CP000967); Xoc BLS256: X. oryzae pv. oryzicola BLS256 (AAQN00000000); Xcv NCPPB702: X. campestris pv. vasculorum NCPPB702 (ACHS00000000); Xau ICPB10535: X. fuscans subsp. aurantifolii ICPB10535 (ACPY00000000); Xau ICPB11122: X. fuscans subsp. aurantifolii ICPB11122 (ACPX00000000); Xve ATCC35937: X. vesicatoria ATCC35937 (AEQV00000000); Xcv 85-10: X. campestris pv. vesicatoria 85-10 (AM039952); Xga ATCC19865: X. gardneri ATCC19865 (AEQX00000000); Xcc 8004: X. campestris pv. campestris 8004 (CP0000509); Xcc ATCC33913: X. campestris pv. campestris ATCC 33913 (AE008922); Xcc B100: X. campestris pv. campestris B100 (AM920689); Xcr 756 C: X. campestris pv. raphani 756 C (CP002789); Xan GPE PC73: X. albilineans GPE PC73(FP565176).b Domains were predicted by the SMART program http://smart.embl-heidelberg.de/. Domain symbol: Glycos_transf_2, glycosyltransferase family 2 domain; SCOP:d1f6da_: UDP-Glycosyltransferase/glycogen phosphorylase superfamily; Glycos_transf_1, glycosyltransferase family 1 domain. The total number of the domains was indicated in the bracket. cAccording to a BLASTP search.
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BMC Microbiology

ISSN: 1471-2180

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