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Table 1 GpsX/XAC3110 homologues in Xanthomonas spp

From: The gpsX gene encoding a glycosyltransferase is important for polysaccharide production and required for full virulence in Xanthomonas citri subsp. citri

Strains a   Homologue   
  Gene/locus_tag Putative product Size (aa) Domain structure b Identity (%) c
Xac 306 gpsX/XAC3110 glycosyltransferase 675 Glycos_transf_2 (1); SCOP:d1f6da_(1)  
Xpe 91-118 XPE_2818 glycosyltransferase 700 Glycos_transf_2 (1); SCOP:d1f6da_(1) 97
Xoo KACC10331 XOO1738 glycosyltransferase 675 Glycos_transf_2 (1); Glycos_transf_1(1); 94
Xoo MAFF311018 XOO_1639 glycosyltransferase 700 Glycos_transf_2 (1); 94
Xoo PXO99A PXO_01594 glycosyltransferase 700 Glycos_transf_2 (1) 94
Xoc BLS256 Xoryp_010100016275 glycosyltransferase 700 Glycos_transf_2 (1); Glycos_transf_1(1); 94
Xcv NCPPB702 XcampvN_010100002613 glycosyltransferase 698 Glycos_transf_2 (1); Glycos_transf_1(1); 94
Xau ICPB10535 XAUC_30140 glycosyltransferase 694 Glycos_transf_2 (1); Glycos_transf_1(1); 93
Xau ICPB11122 XAUB_29140 glycosyltransferase 694 Glycos_transf_2 (1); SCOP:d1f6da_(1) 93
Xve ATCC35937 XVE_0383 glycosyltransferase 701 Glycos_transf_2 (1); SCOP:d1f6da_(1) 93
Xcv 85-10 XCV3242 glycosyltransferase 694 Glycos_transf_2 (1); SCOP:d1f6da_(1) 92
Xga ATCC19865 XGA_4540 glycosyltransferase 700 Glycos_transf_2 (1); SCOP:d1f6da_(1) 92
Xcc 8004 XC_1175 glycosyltransferase 675 Glycos_transf_2 (1); Glycos_transf_1(1); 90
Xcc ATCC33913 XCC2933 glycosyltransferase 700 Glycos_transf_2 (1); Glycos_transf_1(1); 89
Xcc B100 xccb100_1219 hypothetical protein 700 Glycos_transf_2 (1); SCOP:d1f6da_(1) 89
Xcr 756C XCR_3304 glycosyltransferase 700 Glycos_transf_2 (1); SCOP:d1f6da_(1) 89
Xan GPE PC73 XALc_2250 glycosyltransferase 698 Glycos_transf_2 (1); Glycos_transf_1(1); 70
  1. a Xac 306: X. axonopodis pv. citri strain 306 (GenBank accession number: AE008923); Xpe 91-118: X. perforans 91-118 (AEQW00000000); Xoo KACC10331: X. oryzae pv. oryzae KACC10331 (AE0135983); Xoo MAFF311018: X. oryzae pv. oryzae MAFF311018 (AP008229); Xoo PXO99A: X. oryzae pv. oryzae PXO99A (CP000967); Xoc BLS256: X. oryzae pv. oryzicola BLS256 (AAQN00000000); Xcv NCPPB702: X. campestris pv. vasculorum NCPPB702 (ACHS00000000); Xau ICPB10535: X. fuscans subsp. aurantifolii ICPB10535 (ACPY00000000); Xau ICPB11122: X. fuscans subsp. aurantifolii ICPB11122 (ACPX00000000); Xve ATCC35937: X. vesicatoria ATCC35937 (AEQV00000000); Xcv 85-10: X. campestris pv. vesicatoria 85-10 (AM039952); Xga ATCC19865: X. gardneri ATCC19865 (AEQX00000000); Xcc 8004: X. campestris pv. campestris 8004 (CP0000509); Xcc ATCC33913: X. campestris pv. campestris ATCC 33913 (AE008922); Xcc B100: X. campestris pv. campestris B100 (AM920689); Xcr 756 C: X. campestris pv. raphani 756 C (CP002789); Xan GPE PC73: X. albilineans GPE PC73(FP565176).b Domains were predicted by the SMART program http://smart.embl-heidelberg.de/. Domain symbol: Glycos_transf_2, glycosyltransferase family 2 domain; SCOP:d1f6da_: UDP-Glycosyltransferase/glycogen phosphorylase superfamily; Glycos_transf_1, glycosyltransferase family 1 domain. The total number of the domains was indicated in the bracket. cAccording to a BLASTP search.
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BMC Microbiology

ISSN: 1471-2180

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