From: Insights into the CRISPR/Cas system of Gardnerella vaginalis
Strain | Reference | Clinical status | Biotype | Sialidase A | Vaginolysin | CRISPR | |||
---|---|---|---|---|---|---|---|---|---|
 |  |  |  | Coding gene | Activity | Coding gene | Production level | Number of spacers | Number of unique spacers |
ATCC 14019 | [15] | BV | ND | + | ND | + | ND | 30 | 24 |
ATCC 14018 | [15] | BV | 1 | - | - | + | ND | 30 | 24 |
409-05 | [15] | Asymptomatic BV | ND | - | - | + | ND | 7 | 7 |
HMP9231 | CP0027525.1 | Not known | ND | + | ND | + | ND | - | - |
101 | [14] | BV | ND | + | ND | + | ND | - | - |
41V | AEJE01000000.1 | Healthy woman | ND | + | ND | + | ND | - | - |
315A | AFDI01000000.1 | Not known | ND | + | ND | + | ND | 11 | 0 |
5-1 | [14] | Healthy woman | ND | - | - | + | ND | 6 | 6 |
AMD | [14] | BV | ND | - | - | + | ND | 13 | 13 |
284V | [22] | Abnormal discharge & odor | 1 | + | ND | + | ND | 2 | 1 |
75712 | [22] | BV | 1 | + | ND | + | ND | 3 | 2 |
0288E | [22] | Abnormal discharge & odor | 1 | + | ND | + | ND | 3 | 1 |
6420LIT | [22] | Healthy woman | 2 | - | - | + | ND | - | - |
6420B | [22] | Healthy woman | 2 | - | - | + | ND | - | - |
55152 | [22] | Asymptomatic BV | 3 | + | ND | + | ND | - | - |
1400E | [22] | Nugent score 9 | 4 | + | ND | + | ND | 1 | 1 |
1500E | [22] | Nugent score 7 | 5 | + | ND | + | ND | 5 | 5 |
00703Bmash | [22] | BV | 2 or 5 | + | ND | + | ND | 13 | 11 |
00703C2mash | [22] | BV | 2 or 5 | + | ND | + | ND | 6 | 3 |
00703Dmash | [22] | BV | 3 or 7 | + | ND | + | ND | - | - |
6119V5 | [22] | Nugent score 5 | 7 | + | ND | + | ND | 8 | 7 |
GV15 | [18] | BV | 5 | + | S | + | Low | - | - |
GV17 | [18] | BV | 5 | + | S | + | Low | - | - |
GV21 | [18] | BV | 1 | + | W | + | Medium | 11 | 10 |
GV22 | [18] | BV | 2 | + | - | + | Low | 30 | 13 |
GV23 | [18] | BV | 1 | + | W | + | High | - | - |
GV24 | [18] | BV | 1 | + | - | + | Low | - | - |
GV25 | [18] | BV | 1 | + | W | + | Low | 50 | 40 |
GV26 | [18] | BV | 1 | + | - | + | Low | - | - |
GV28 | [18] | BV | 5 | + | S | + | High | 37 | 25 |
GV29 | [18] | BV | 1 | + | - | + | Low | - | - |
GV30 | [18] | BV | 1 | + | - | + | Low | 29 | 27 |
GV31 | [18] | BV | 1 | + | W | + | Medium | - | - |
GV32 | [18] | BV | 1 | + | - | + | Medium | - | - |
GV33 | [18] | BV | 5 | + | S | + | Low | 18 | 14 |
GV34 | [18] | BV | 4 | + | - | + | Low | - | - |
GV35 | [18] | BV | 5 | + | S | + | Low | - | - |
GV36 | [18] | BV | 2 | + | S | + | Medium | - | - |