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Table 1 G. vaginalis CRISPR spacers and known virulence features

From: Insights into the CRISPR/Cas system of Gardnerella vaginalis

Strain

Reference

Clinical status

Biotype

Sialidase A

Vaginolysin

CRISPR

    

Coding gene

Activity

Coding gene

Production level

Number of spacers

Number of unique spacers

ATCC 14019

[15]

BV

ND

+

ND

+

ND

30

24

ATCC 14018

[15]

BV

1

-

-

+

ND

30

24

409-05

[15]

Asymptomatic BV

ND

-

-

+

ND

7

7

HMP9231

CP0027525.1

Not known

ND

+

ND

+

ND

-

-

101

[14]

BV

ND

+

ND

+

ND

-

-

41V

AEJE01000000.1

Healthy woman

ND

+

ND

+

ND

-

-

315A

AFDI01000000.1

Not known

ND

+

ND

+

ND

11

0

5-1

[14]

Healthy woman

ND

-

-

+

ND

6

6

AMD

[14]

BV

ND

-

-

+

ND

13

13

284V

[22]

Abnormal discharge & odor

1

+

ND

+

ND

2

1

75712

[22]

BV

1

+

ND

+

ND

3

2

0288E

[22]

Abnormal discharge & odor

1

+

ND

+

ND

3

1

6420LIT

[22]

Healthy woman

2

-

-

+

ND

-

-

6420B

[22]

Healthy woman

2

-

-

+

ND

-

-

55152

[22]

Asymptomatic BV

3

+

ND

+

ND

-

-

1400E

[22]

Nugent score 9

4

+

ND

+

ND

1

1

1500E

[22]

Nugent score 7

5

+

ND

+

ND

5

5

00703Bmash

[22]

BV

2 or 5

+

ND

+

ND

13

11

00703C2mash

[22]

BV

2 or 5

+

ND

+

ND

6

3

00703Dmash

[22]

BV

3 or 7

+

ND

+

ND

-

-

6119V5

[22]

Nugent score 5

7

+

ND

+

ND

8

7

GV15

[18]

BV

5

+

S

+

Low

-

-

GV17

[18]

BV

5

+

S

+

Low

-

-

GV21

[18]

BV

1

+

W

+

Medium

11

10

GV22

[18]

BV

2

+

-

+

Low

30

13

GV23

[18]

BV

1

+

W

+

High

-

-

GV24

[18]

BV

1

+

-

+

Low

-

-

GV25

[18]

BV

1

+

W

+

Low

50

40

GV26

[18]

BV

1

+

-

+

Low

-

-

GV28

[18]

BV

5

+

S

+

High

37

25

GV29

[18]

BV

1

+

-

+

Low

-

-

GV30

[18]

BV

1

+

-

+

Low

29

27

GV31

[18]

BV

1

+

W

+

Medium

-

-

GV32

[18]

BV

1

+

-

+

Medium

-

-

GV33

[18]

BV

5

+

S

+

Low

18

14

GV34

[18]

BV

4

+

-

+

Low

-

-

GV35

[18]

BV

5

+

S

+

Low

-

-

GV36

[18]

BV

2

+

S

+

Medium

-

-

  1. ND – not done.