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Table 1 Isolate screening data

From: Genome characterization and population genetic structure of the zoonotic pathogen, Streptococcus canis

ID

Host/Tissue

Herd/State/Country

N1

N2

Ribotype

ST

CC

FSL Z3-022

Bovine

Not available, Belgium

1

 

116-1000-4

1

3

IT-SCA-35

Bovine

I-1, Italy

3

 

116-679-1

1

3

IT-SCA-65

Bovine

I-2, Italy

3

 

116-679-1

1

3

IT-SCA-73

Bovine

I-3, Italy

1

 

116-679-1

1

3

IT-SCA-31

Bovine

I-4, Italy

1

 

116-1000-4

1

3

IT-SCA-92

Bovine

I-5, Italy

3

 

116-1000-4

1

3

IT-SCA-80

Bovine

I-6, Italy

2

 

116-1000-4

2

3

IT-SCA-24

Bovine

I-7, Italy

3

 

116-679-1

1

3

FSL Z3-012*

Bovine

U-1, NY, USA

4

 

116-679-1

1

3

FSL Z3-006*

Bovine

U-2, NY, USA

4

 

116-679-1

1

3

R2-766

Bovine

U-3, NY, USA

5

 

116-679-1

1

3

FSL Z3-227*

Bovine

U-4, NY, USA

11

 

116-679-1

1

3

FSL Z3-316

Bovine

U-5, NY, USA

3

21

116-1180-4

14

 

FSL Z3-010

Bovine

U-6, NY, USA

4

 

116-975-3

14

 

FSL Z3-346

Bovine

U-7, NY, USA

2

 

116-679-1

1

3

FSL Z3-013*

Bovine

U-8, NY, USA

2

 

116-975-3

14

 

FSL Z3-015*

Bovine

U-9, NY, USA

1

12

116-975-3

14

 

FSL Z3-011*

Bovine

U-10, NY, USA

1

 

116-679-1

1

3

FSL Z3-234*

Bovine

U-10, NY, USA

2

 

116-975-3

14

 

FSL Z3-023*

Canine, wound exudate

Not available, Belgium

  

1000-5

11

2

FSL Z3-046*

Canine, lip

NY, USA

  

1168-1

9

 

FSL Z3-048

Canine, ear swab

NY, USA

  

1000-5

11

2

FSL Z3-049

Canine, ear swab

NY, USA

  

1000-4

1

3

FSL Z3-050

Canine, vaginal swab

NY, USA

  

1000-4

1

3

FSL Z3-053

Canine, vaginal swab

NY, USA

  

679-1

1

3

FSL Z3-054

Canine, vaginal swab

NY, USA

  

679-1

1

3

FSL Z3-057

Canine, hock abscess

NY, USA

  

975-3

15

 

FSL Z3-058

Canine, ear swab

NY, USA

  

1171-2

6

 

FSL Z3-116

Canine, pharyngeal swab

NY, USA

  

1168-5

8

 

FSL Z3-117

Canine, ear swab

NY, USA

  

1000-5

12

2

FSL Z3-118

Canine, ear swab

NY, USA

  

697-1

1

3

FSL Z3-119

Canine, ear swab

NY, USA

  

1000-4

9

4

FSL Z3-120

Canine, vaginal swab

NY, USA

  

679-1

1

3

FSL Z3-121*

Canine, vaginal swab

NY, USA

  

1173-7

4

1

FSL Z3-154*

Canine, vaginal swab

NY, USA

  

1173-8

10

4

FSL Z3-155

Canine, urine

NY, USA

  

679-1

1

3

FSL Z3-156

Canine, throat

NY, USA

  

1168-1

10

4

FSL Z3-157*

Canine, pharyngeal swab

NY, USA

  

1174-4

16

1

FSL Z3-158

Canine, pharyngeal swab

NY, USA

  

1174-4

5

1

FSL Z3-159

Canine, eye

NY, USA

  

679-1

3

3

FSL Z3-160

Canine, vaginal swab

NY, USA

  

679-1

3

3

FSL Z3-162*

Canine, ear swab

NY, USA

  

1174-7

13

2

FSL Z3-163

Canine, dermis

NY, USA

  

679-1

1

3

FSL Z3-165

Canine, vaginal swab

NY, USA

  

1000-5

11

2

FSL Z3-166*

Canine, pharyngeal swab

NY, USA

  

1170-7

7

 

FSL Z3-007*

Feline

U-4, NY, USA

  

679-1

1

3

  1. N1 = Number of isolates from each herd ribotyped (either individual cow or quarter milk sample). For each herd, only one isolate representing a distinct ribotype was typed using MLST.
  2. N2 = Number of isolates from milking machine rubber liners or bulk tank milk.
  3. ST = sequence type.
  4. CC = clonal complex.
  5. 1 Isolated from milking machine rubber liners.
  6. 2 Isolated from bulk tank milk.
  7. * Isolate contains plasmid (see text).
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BMC Microbiology

ISSN: 1471-2180

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