Strain name | Type | Geographic location | Year | Length of sequence (Mb) | Disease/ Site of isolation |
---|---|---|---|---|---|
RM7190 | a | Malaysia | 1973 | 1.5 | meningitis |
RM6062 | a | England | 1965 | 1.5 | nasopharynx |
RM6064 | a | England | 1966 | 1.5 | pleural fluid |
RM6073 | a | England | 1966 | 1.6 | bronchitis |
RM7017 | b | Ghana | 1983 | 1.6 | CSF |
RM7060 | b | New York, USA | 1971 | 1.5 | nasopharynx |
RM7414 | b | Kenya | 1980’s | 1.5 |  |
RM7419 | b | Kenya | 1980’s | 1.5 |  |
RM7651 | b | Norway | 1976 | 1.7 | Â |
DC11238 | b | UK | 2003 | 1.8 | meningitis |
DC800 | b | UK | 1989 | 1.9 | meningitis |
DC8708 | b | UK | 2000 | 1.8 | Â |
DCG1574 | b | Gambia | 1993 | 1.8 | nasopharynx |
Eagan | b | Â | Â | 1.5 | Â |
RM7578 | b | Switzerland | 1983 | 1.8 | Â |
RM7582 | b | RSA | 1980’s | 1.8 |  |
RM7598 | b | USA | 1985 | 1.8 | Â |
RM7018 | b* | Ghana | 1983 | 1.4 | CSF |
RM7122 | b* | Australia | <1984 | 1.5 | meningitis |
RM7459 | b* | Iceland | 1984 | 1.4 | CSF |
RM7465 | b* | Iceland | 1985 | 1.6 | CSF |
RM7617 | b* | Malaysia | 1970’s | 1.5 | CSF |
RM6132 | c | England | 1964 | 1.6 | chronic sinusitis |
RM6134 | c | England | 1975 | 1.4 | abscess |
RM7422 | c | Kenya | 1986 | 1.4 | Â |
RM6158 | e | England | 1962 | 1.7 | cystic fibrosis |
RM6237 | f | England | 1963 | 1.4 | nasal discharge |
RM7283 | f | Malaysia | 1972 | 1.5 | trachea |
RM7290 | f | Malaysia | 1974 | 1.5 | trachea(malnutrition) |
PLMIOG2822H-L | H. haemolyticus | Â | Â | 1.6 | Â |
PLh.hlnctc10659T | H. haemolyticus | Â | Â | 1.6 | Â |
PLHparaphorH-L | H. paraphrophilus | Â | Â | 1.7 | Â |
PLMIOG2838H-L | H. haemolyticus | Â | Â | 1.4 | Â |
DCMO-099-5-LST-8 | H. parainfluenzae | UK | 1997 | 1.7 | nasopharynx (commensal) |
DCMO-099-8-MST-8 | H. parainfluenzae | UK | 1997 | 1.6 | nasopharynx (commensal) |
DCO-CFE24-1-T2ST-27 | H. parainfluenzae | UK | 2001 | 1.8 | nasopharynx (commensal) |
DCO-OM30-1-A1 | H. parainfluenzae | UK | 2001 | 1.6 | nasopharynx (commensal) |
DCT2T1ST-34 | H. parainfluenzae | Gambia | 2001 | 1.9 | nasopharynx (commensal) |
DCT5A1ST-41 | H. parainfluenzae | Gambia | 2001 | 1.9 | nasopharynx (commensal) |
DCT7B2ST-47 | H. parainfluenzae | Gambia | 2001 | 1.8 | nasopharynx (commensal) |
DCT8A1ST-52 | H. parainfluenzae | Gambia | 2001 | 1.9 | nasopharynx (commensal) |
RY15 | H. parainfluenzae | Â | Â | 1.7 | nasopharynx (commensal) |
RY20 | H. parainfluenzae | Â | Â | 1.7 | nasopharynx (commensal) |
RY22 | H. parainfluenzae | Â | Â | 1.9 | nasopharynx (commensal) |
RY8 | H. parainfluenzae | Â | Â | 1.7 | nasopharynx (commensal) |
DCT2B3ST-33 | hybrid | Gambia | 2001 | 1.4 | nasopharynx (commensal) |
DCG-T53T1 | hybrid | Gambia | 2001 | 1.5 | nasopharynx (commensal) |
DCT8B3ST-51 | hybrid | Gambia | 2001 | 1.5 | nasopharynx (commensal) |
DH1500spain | NTHi | Spain | 2000 | 1.4 | COPD |
DH1559spain | NTHi | Spain | 2000 | 1.5 | COPD |
DH1630spain | NTHi | Spain | 2000 | 1.3 | COPD |
DH398spain | NTHi | Spain | 2000 | 1.5 | COPD |
Fi176 | NTHi | Finland | 1995 | 1.5 | otitis media |
Fi723 | NTHi | Finland | 1995 | 1.6 | otitis media |
Fi981 | NTHi | Finland | 1995 | 1.7 | otitis media |
RM6011 | NTHi | UK | 1984 | 1.3 | meningitis |
RM6019 | NTHi | UK | 1984 | 1.3 | meningitis |
RM6033 | NTHi | UK | 1984 | 1.5 | pus hydrosalpinx |
RM6051 | NTHi | UK | 1985 | 1.5 | CSF |
RM7028 | NTHi | PNG | 1980’s | 1.5 | blood |
RM7308 | NTHi | South Korea | 1984 | 1.5 | nasopharynx |
RM7309 | NTHi | South Korea | 1984 | 1.5 | nasopharynx |
RM7347 | NTHi | USA | 1985 | 1.4 | sputum |
RM7448 | NTHi | Iceland | 1978 | 1.4 | blood |
RM7477 | NTHi | Iceland | 1986 | 1.6 | Â |
RM7490 | NTHi | RSA | 1980’s | 1.6 | CSF |
DH1513spain | NTHi | Spain | 2000 | 1.5 | COPD |
Fi1180 | NTHi | Finland | 1995 | 1.6 | otitis media |
Fi162 | NTHi | Finland | 1995 | 1.7 | otitis media |
Fi667 | NTHi | Finland | 1995 | 1.7 | otitis media |
RM7029 | NTHi | PNG | 1980’s | 1.6 | blood |
RM7637 | NTHi | China | 1971 | 1.4 | sputum |
DC7331 | NTHi | UK | 1997 | 1.8 | meningitis |
DC7654 | NTHi | UK | 1997 | 1.8 | blood |
DC7695 | NTHi | UK | 1997 | 1.9 | CSF |
DCg2120 | NTHi | Gambia | Â | 1.8 | nasopharynx |
DCH3151 | NTHi | Gambia | 1993 | 1.8 | pneumonia |
DCO-OM33-2B3ST-21 | NTHi | UK | 2001 | 1.5 | nasopharynx |
PLMIOG2819 | Â | Â | Â | 1.5 | Â |
PLMIOG2820 | Â | Â | Â | 1.5 | Â |
RM6006 | Â | Â | Â | 1.4 | Â |
PLMIOG2836 | Â | Â | Â | 1.7 | Â |
DCMO-009-14-S-TR-ST-12 | Â | UK | 1998 | 1.6 | nasopharynx |
PL10839T | Â | Â | Â | 1.6 | Â |
PLMIOG2837 | Â | Â | Â | 1.6 | Â |
RM7054 | NTHi | USA | 1984 | Â | blood (sepsis) |
Fi1247 | NTHi | Finland | 1995 | Â | otitis media |
Fi1124 | NTHi | Finland | 1995 | Â | otitis media |
Fi486 | NTHi | Finland | 1995 | Â | otitis media |
Fi432 | NTHi | Finland | 1995 | Â | otitis media |
RM7068 | NTHi | PNG | Â | Â | pneumonia |
Fi285 | NTHi | Finland | 1995 | Â | otitis media |
PP H.parasuis | NTHi | Â | Â | Â | Â |
RM7876 | Â | Â | Â | Â | Â |
Fi1200 | NTHi | Finland | 1995 | Â | otitis media |
RM7066 | Â | Â | Â | Â | Â |