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Table 2 List of strains used in this work

From: Synergies between RNA degradation and trans-translation in Streptococcus pneumoniae: cross regulation and co-transcription of RNase R and SmpB

Strain

Relevant markers/Genotype

Source/Reference

E. coli

  

DH5α

F' fhuA2 Δ(argF-lacZ)U169 phoA glnV44 Φ80 Δ(lacZ)M15 gyrA96 recA1 relA1 endA1 thi-1 hsdR17a

[52]

CMA601

E. coli DH5α carrying pSDA-02

This work

BL21(DE3)

FompT gal dcm lon hsdSB(rB- mB-) λ(DE3 [lacI lacUV5-T7 gene 1 ind1 sam7 nin5])

[53]

CMA602

E. coli BL21(DE3) overexpressing His-tagged RNase R from S. pneumoniae TIGR4

[54]

CMA603

E. coli BL21(DE3) carrying pSDA-02

This work

S. pneumoniae

  

JNR7/87 (TIGR4)

 

[51]

TIGR4 RNase R-

TIGR4 rnr-rnr-CmR)

C. Arraiano and P. Lopez Labsa

CMA604

TIGR4 rnr-rnr-CmR) carrying pIL253 (EryR) expressing RNase R

This work

CMA605

TIGR4 smpB-smpB-KanR)

This work

CMA606

TIGR4 smpB-smpB-KanR) carrying pLS1GFP (EryR) expressing SmpB

This work

  1. a Manuscript in preparation.