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Table 1 Location of genes encoding HupL, HupF, HupK, and HypC proteins in genomes from Proteobacteria

From: Dual role of HupF in the biosynthesis of [NiFe] hydrogenase in Rhizobium leguminosarum

Bacterial species #a KEGGbLocus designation for homolog to
   HupL HupF HupK HypC
Alkalimnicola ehrlichei 1 Mlg_2028 Mlg_2025 Mlg_2020 Mlg_2016
Azoarcus sp. BH72 2 azo3787 azo3793 azo3798 azo3802
Azotobacter vinelandii 3 Avin_50580 Avin_50550 Avin_50500 Avin_50460
Beijerinckia indica 4 Bind_1151 Bind_1154 Bind_1158 Bind_1162
Bradyrhizobium sp. ORS278 5 BRADO1685 BRADO1688 BRADO1693 BRADO1698
Bradyrhizobium japonicum USDA110 6 bsl6941 bsl6938 bll6933 bsl6929
Bradyrhizobium sp. BTAi1 7 BBta_1997 BBta_2000 BBta_2005 BBta_2009
Burkholderia vietnamiensis 8 Bcep1808_5932 Bcep1808_5935 Bcep1808_5940 Bcep1808_5944
Burkholderia phymatum 9 Bphy_7264 Bphy_7261 Bphy_7257 Bphy_7253
Dechloromonas aromatica 10 Daro_3988 Daro_3985 Daro_3980 Daro_3967
Magnetococcus sp. 11 Mmc1_2503 Mmc1_2501 Mmc1_2497 Mmc1_2490
Magnetospirillum magneticum 12 amb1647 amb1645 amb1644 amb1640
Methylibium petroleiphilum 13 Mpe_A2826 Mpe_A2821 Mpe_A2817 Mpe_A2813
Paracoccus denitrificans 14 Pden_3098 Pden_3102 Pden_3106 Pden_3110
Polaromonas naphtalenivorans 15 Pnap_1974 Pnap_1970 Pnap_1965 Pnap_1961
Ralstonia metallidurans 16 Rmet1297 Rmet1292 Rmet1287 Rmet1283
Rhodobacter sphaeroides ATCC17029 17 Rsph17029_2147 Rsph17029_2151 Rsph17029_2155 Rsph17029_2159
Rhodoferax ferrireducens 18 Rfer_4091 Rfer_4093 Rfer_4118 Rfer_4098
Rhodopseudomonas palustris 19 RPA0963 RPA0967 RPA0972 RPA0976
Rhodospirillum rubrum ATCC11170 20 Rru_A1162 Rru_A1165 Rru_A1167 Rru_A0307
Xanthobacer autotrophicus 21 Xaut_2174 Xaut_2177 Xaut_2181 Xaut_2185
  1. aTaken from KEGG gene database (http://www.genome.jp/kegg/genes.html).
  2. bOrdinal numbers used in phylogenetic tree of Figure 1.