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Table 1 Location of genes encoding HupL, HupF, HupK, and HypC proteins in genomes from Proteobacteria

From: Dual role of HupF in the biosynthesis of [NiFe] hydrogenase in Rhizobium leguminosarum

Bacterial species

#a

KEGGbLocus designation for homolog to

  

HupL

HupF

HupK

HypC

Alkalimnicola ehrlichei

1

Mlg_2028

Mlg_2025

Mlg_2020

Mlg_2016

Azoarcus sp. BH72

2

azo3787

azo3793

azo3798

azo3802

Azotobacter vinelandii

3

Avin_50580

Avin_50550

Avin_50500

Avin_50460

Beijerinckia indica

4

Bind_1151

Bind_1154

Bind_1158

Bind_1162

Bradyrhizobium sp. ORS278

5

BRADO1685

BRADO1688

BRADO1693

BRADO1698

Bradyrhizobium japonicum USDA110

6

bsl6941

bsl6938

bll6933

bsl6929

Bradyrhizobium sp. BTAi1

7

BBta_1997

BBta_2000

BBta_2005

BBta_2009

Burkholderia vietnamiensis

8

Bcep1808_5932

Bcep1808_5935

Bcep1808_5940

Bcep1808_5944

Burkholderia phymatum

9

Bphy_7264

Bphy_7261

Bphy_7257

Bphy_7253

Dechloromonas aromatica

10

Daro_3988

Daro_3985

Daro_3980

Daro_3967

Magnetococcus sp.

11

Mmc1_2503

Mmc1_2501

Mmc1_2497

Mmc1_2490

Magnetospirillum magneticum

12

amb1647

amb1645

amb1644

amb1640

Methylibium petroleiphilum

13

Mpe_A2826

Mpe_A2821

Mpe_A2817

Mpe_A2813

Paracoccus denitrificans

14

Pden_3098

Pden_3102

Pden_3106

Pden_3110

Polaromonas naphtalenivorans

15

Pnap_1974

Pnap_1970

Pnap_1965

Pnap_1961

Ralstonia metallidurans

16

Rmet1297

Rmet1292

Rmet1287

Rmet1283

Rhodobacter sphaeroides ATCC17029

17

Rsph17029_2147

Rsph17029_2151

Rsph17029_2155

Rsph17029_2159

Rhodoferax ferrireducens

18

Rfer_4091

Rfer_4093

Rfer_4118

Rfer_4098

Rhodopseudomonas palustris

19

RPA0963

RPA0967

RPA0972

RPA0976

Rhodospirillum rubrum ATCC11170

20

Rru_A1162

Rru_A1165

Rru_A1167

Rru_A0307

Xanthobacer autotrophicus

21

Xaut_2174

Xaut_2177

Xaut_2181

Xaut_2185

  1. aTaken from KEGG gene database (http://www.genome.jp/kegg/genes.html).
  2. bOrdinal numbers used in phylogenetic tree of Figure 1.