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Table 1 Similarity values of rumen methanogens from yak and cattle from Qinghai-Tibetan Plateau, China

From: Comparison of methanogen diversity of yak (Bos grunniens) and cattle (Bos taurus) from the Qinghai-Tibetan plateau, China

Yak

Cattle

16S Sequence

Clonesa

OTU#

Nearest Taxon

% Seq ID

16S Sequence

Clonesa

OTU#

Nearest Taxon

% Seq ID

QTPYAK1

5

74

Mms. luminyensis

88.2

QTPC1

2

82

Mbb. millerae

98.6

QTPYAK2

1

74

Mms. luminyensis

88.1

QTPC2

1

82

Mbb. millerae

99.0

QTPYAK3

1

82

Mbb. millerae

97.9

QTPC3

3

82

Mbb. millerae

98.2

QTPYAK4

1

82

Mbb. millerae

98.1

QTPC4

4

49

Mms. luminyensis

87.9

QTPYAK5

1

82

Mbb. millerae

97.6

QTPC5

1

63

Mms. luminyensis

88.4

QTPYAK6

1

82

Mbb. millerae

98.3

QTPC6

4

49

Mms. luminyensis

87.8

QTPYAK7

2

82

Mbb. millerae

98.1

QTPC7

1

33

Mms. luminyensis

87.8

QTPYAK8

1

84

Mbb. millerae

97.1

QTPC8

1

82

Mbb. millerae

99.1

QTPYAK9

1

82

Mbb. millerae

98.0

QTPC9

2

82

Mbb. gottschalkii

97.6

QTPYAK10

1

82

Mbb. millerae

98.2

QTPC10

1

82

Mbb. millerae

98.3

QTPYAK11

1

83

Mbb. millerae

97.7

QTPC11

1

82

Mbb. millerae

98.3

QTPYAK12

1

89

Mbb. smithii

96.3

QTPC12

1

82

Mbb. millerae

97.7

QTPYAK13

1

50

Mms. luminyensis

87.9

QTPC13

1

82

Mbb. millerae

98.4

QTPYAK14

2

51

Mms. luminyensis

88.8

QTPC14

1

82

Mbb. millerae

98.7

QTPYAK15

2

36

Mms. luminyensis

87.1

QTPC15

1

82

Mbb. gottschalkii

98.4

QTPYAK16

1

52

Mms. luminyensis

87.8

QTPC16

1

10

Mms. luminyensis

87.1

QTPYAK17

3

49

Mms. luminyensis

88.2

QTPC17

3

82

Mbb. millerae

98.0

QTPYAK18

1

53

Mms. luminyensis

88.0

QTPC18

1

82

Mbb. millerae

97.9

QTPYAK19

1

16

Mms. luminyensis

87.0

QTPC19

2

82

Mbb. millerae

97.9

QTPYAK20

1

68

Mms. luminyensis

87.4

QTPC20

1

82

Mbb. millerae

98.3

QTPYAK21

1

4

Mms. luminyensis

88.0

QTPC21

1

82

Mbb. millerae

98.5

QTPYAK22

2

49

Mms. luminyensis

88.1

QTPC22

1

82

Mbb. millerae

98.4

QTPYAK23

2

49

Mms. luminyensis

88.1

QTPC23

2

82

Mbb. millerae

97.7

QTPYAK24

2

61

Mms. luminyensis

88.4

QTPC24

1

82

Mbb. millerae

98.3

QTPYAK25

1

62

Mms. luminyensis

88.6

QTPC25

2

82

Mbb. millerae

98.1

QTPYAK26

4

49

Mms. luminyensis

88.0

QTPC26

2

82

Mbb. millerae

97.9

QTPYAK27

1

49

Mms. luminyensis

87.8

QTPC27

1

86

Mbb. smithii

96.8

QTPYAK28

1

49

Mms. luminyensis

88.5

QTPC28

1

49

Mms. luminyensis

87.9

QTPYAK29

1

49

Mms. luminyensis

87.8

QTPC29

2

28

Mms. luminyensis

86.8

QTPYAK30

2

85

Mbb. smithii

97.5

QTPC30

6

80

Mmb. mobile

99.7

QTPYAK31

2

82

Mbb. millerae

98.3

QTPC31

1

80

Mmb. mobile

99.7

QTPYAK32

3

88

Mbb. millerae

97.0

QTPC32

1

80

Mmb. mobile

99.4

QTPYAK33

1

90

Mbb. millerae

97.0

QTPC33

3

80

Mmb. mobile

99.5

QTPYAK34

1

70

Mms. luminyensis

88.5

QTPC34

2

80

Mmb. mobile

99.5

QTPYAK35

1

70

Mms. luminyensis

88.4

QTPC35

7

80

Mmb. mobile

99.8

QTPYAK36

1

70

Mms. luminyensis

88.4

QTPC36

4

70

Mms. luminyensis

88.0

QTPYAK37

1

70

Mms. luminyensis

88.3

QTPC37

3

16

Mms. luminyensis

86.6

QTPYAK38

1

77

Mms. luminyensis

87.9

QTPC38

5

39

Mms. luminyensis

86.6

QTPYAK39

3

70

Mms. luminyensis

88.5

QTPC39

9

39

Mms. luminyensis

86.5

QTPYAK40

1

70

Mms. luminyensis

88.4

QTPC40

2

39

Mms. luminyensis

86.7

QTPYAK41

1

70

Mms. luminyensis

88.4

QTPC41

1

16

Mms. luminyensis

86.5

QTPYAK42

1

70

Mms. luminyensis

88.6

QTPC42

3

58

Mms. luminyensis

87.8

QTPYAK43

4

74

Mms. luminyensis

87.8

QTPC43

2

16

Mms. luminyensis

86.7

QTPYAK44

4

74

Mms. luminyensis

87.9

QTPC44

3

58

Mms. luminyensis

88.3

QTPYAK45

2

74

Mms. luminyensis

87.9

QTPC45

4

69

Mms. luminyensis

86.6

QTPYAK46

1

71

Mms. luminyensis

88.6

QTPC46

1

56

Mms. luminyensis

87.9

QTPYAK47

7

81

Mmc. blatticola

92.9

QTPC47

1

55

Mms. luminyensis

87.9

QTPYAK48

2

81

Mmc. blatticola

92.9

QTPC48

1

67

Mms. luminyensis

88.6

QTPYAK49

1

81

Mmc. blatticola

91.7

QTPC49

1

82

Mbb. millerae

98.5

QTPYAK50

2

81

Mmc. blatticola

92.6

QTPC50

1

1

Mms. luminyensis

87.6

QTPYAK51

2

49

Mms. luminyensis

88.7

QTPC51

1

82

Mbb. millerae

97.5

QTPYAK52

1

37

Mms. luminyensis

88.0

QTPC52

1

82

Mbb. millerae

98.3

QTPYAK53

1

57

Mms. luminyensis

87.7

QTPC53

1

82

Mbb. millerae

98.2

QTPYAK54

2

74

Mms. luminyensis

87.9

QTPC55

1

82

Mbb. millerae

98.8

QTPYAK55

1

76

Mms. luminyensis

87.1

QTPC56

1

25

Mms. luminyensis

86.7

QTPYAK56

2

72

Mms. luminyensis

87.5

QTPC57

1

41

Mms. luminyensis

86.4

QTPYAK57

1

72

Mms. luminyensis

87.6

QTPC58

2

94

Mbb. millerae

96.0

QTPYAK58

2

72

Mms. luminyensis

87.9

QTPC59

2

55

Mms. luminyensis

87.8

QTPYAK59

1

75

Mms. luminyensis

87.3

QTPC60

4

55

Mms. luminyensis

87.7

QTPYAK60

1

70

Mms. luminyensis

88.1

QTPC61

2

55

Mms. luminyensis

87.8

QTPYAK61

1

39

Mms. luminyensis

86.3

QTPC62

1

73

Mms. luminyensis

87.6

QTPYAK62

2

39

Mms. luminyensis

86.2

QTPC63

1

41

Mms. luminyensis

86.5

QTPYAK63

2

39

Mms. luminyensis

86.5

QTPC64

1

91

Mbb. millerae

96.1

QTPYAK64

4

46

Mms. luminyensis

86.7

QTPC65

1

73

Mms. luminyensis

87.5

QTPYAK65

1

49

Mms. luminyensis

88.4

QTPC66

1

40

Mms. luminyensis

87.4

QTPYAK67

2

80

Mmb. mobile

99.8

QTPC68

1

7

Mms. luminyensis

87.4

QTPYAK68

1

64

Mms. luminyensis

87.5

QTPC69

1

82

Mbb. millerae

98.6

QTPYAK69

2

93

Mbb. ruminantium

96.7

QTPC70

1

94

Mbb. arboriphilus

95.5

QTPYAK70

1

87

Mbb. ruminantium

96.8

QTPC71

1

59

Mms. luminyensis

88.9

QTPYAK71

1

87

Mbb. smithii

96.5

QTPC72

1

59

Mms. luminyensis

89.2

QTPYAK72

1

32

Mms. luminyensis

86.8

QTPC73

3

1

Mms. luminyensis

87.8

QTPYAK73

1

92

Mbb. ruminantium

98.1

QTPC74

10

16

Mms. luminyensis

86.6

QTPYAK74

1

92

Mbb. ruminantium

98.9

QTPC75

1

16

Mms. luminyensis

86.5

QTPYAK75

1

35

Mms. luminyensis

87.2

QTPC76

2

16

Mms. luminyensis

86.6

QTPYAK76

1

49

Mms. luminyensis

88.4

QTPC77

6

16

Mms. luminyensis

86.6

QTPYAK77

1

42

Mms. luminyensis

88.3

QTPC78

1

16

Mms. luminyensis

86.6

QTPYAK78

1

42

Mms. luminyensis

87.5

QTPC79

1

24

Mms. luminyensis

87.0

QTPYAK79

1

16

Mms. luminyensis

86.6

QTPC80

1

16

Mms. luminyensis

86.2

QTPYAK80

1

16

Mms. luminyensis

86.7

QTPC81

1

16

Mms. luminyensis

86.7

QTPYAK81

10

16

Mms. luminyensis

86.6

QTPC82

1

20

Mms. luminyensis

83.8

QTPYAK82

1

16

Mms. luminyensis

86.5

QTPC83

1

9

Mms. luminyensis

87.6

QTPYAK83

1

16

Mms. luminyensis

86.4

QTPC84

1

24

Mms. luminyensis

86.4

QTPYAK84

3

16

Mms. luminyensis

86.4

QTPC85

1

26

Mms. luminyensis

86.4

QTPYAK85

1

16

Mms. luminyensis

86.4

QTPC86

2

48

Mms. luminyensis

87.3

QTPYAK86

1

16

Mms. luminyensis

86.7

QTPC87

1

21

Mms. luminyensis

86.8

QTPYAK87

1

16

Mms. luminyensis

86.7

QTPC88

1

23

Mms. luminyensis

86.3

QTPYAK88

1

16

Mms. luminyensis

87.0

QTPC89

1

22

Mms. luminyensis

86.4

QTPYAK89

1

16

Mms. luminyensis

86.6

QTPC90

1

39

Mms. luminyensis

87.3

QTPYAK90

1

16

Mms. luminyensis

86.7

QTPC91

1

42

Mms. luminyensis

87.9

QTPYAK91

2

16

Mms. luminyensis

86.5

QTPC92

1

2

Mms. luminyensis

86.9

QTPYAK92

1

16

Mms. luminyensis

87.4

QTPC93

1

2

Mms. luminyensis

88.0

QTPYAK93

1

16

Mms. luminyensis

87.2

QTPC94

1

1

Mms. luminyensis

87.7

QTPYAK94

6

16

Mms. luminyensis

86.5

QTPC95

6

81

Mmc. blatticola

92.8

QTPYAK95

2

16

Mms. luminyensis

86.3

QTPC96

6

81

Mmc. blatticola

92.5

QTPYAK96

2

16

Mms. luminyensis

87.2

QTPC97

2

39

Mms. luminyensis

87.1

QTPYAK97

1

16

Mms. luminyensis

86.3

QTPC98

1

39

Mms. luminyensis

87.2

QTPYAK98

1

15

Mms. luminyensis

87.2

QTPC99

1

47

Mms. luminyensis

86.4

QTPYAK99

1

27

Mms. luminyensis

87.1

QTPC100

1

59

Mms. luminyensis

88.5

QTPYAK100

1

27

Mms. luminyensis

87.4

QTPC101

1

79

Mms. luminyensis

87.1

QTPYAK101

1

14

Mms. luminyensis

87.0

QTPC102

1

5

Mms. luminyensis

88.4

QTPYAK102

1

24

Mms. luminyensis

86.7

QTPC103

1

6

Mms. luminyensis

87.6

QTPYAK103

1

12

Mms. luminyensis

87.3

QTPC104

1

66

Mms. luminyensis

88.5

QTPYAK104

1

19

Mms. luminyensis

85.5

QTPC105

1

29

Mms. luminyensis

86.4

QTPYAK105

1

13

Mms. luminyensis

87.5

QTPC106

1

45

Mms. luminyensis

87.4

QTPYAK106

1

17

Mms. luminyensis

85.9

QTPC107

1

54

Mms. luminyensis

87.7

QTPYAK107

1

17

Mms. luminyensis

86.4

QTPC108

1

48

Mms. luminyensis

86.7

QTPYAK108

1

11

Mms. luminyensis

86.8

QTPC109

1

30

Mms. luminyensis

86.5

QTPYAK109

3

16

Mms. luminyensis

86.5

QTPC110

1

95

Mbb. wolinii

95.7

QTPYAK110

1

18

Mms. luminyensis

86.2

QTPC111

1

39

Mms. luminyensis

86.3

QTPYAK111

1

16

Mms. luminyensis

86.8

QTPC112

1

92

Mbb. ruminantium

99.0

QTPYAK112

2

16

Mms. luminyensis

85.9

QTPC113

1

43

Mms. luminyensis

88.4

QTPYAK113

1

18

Mms. luminyensis

86.3

QTPC114

1

42

Mms. luminyensis

87.7

QTPYAK114

2

16

Mms. luminyensis

86.2

     

QTPYAK115

1

16

Mms. luminyensis

86.3

     

QTPYAK116

1

34

Mms. luminyensis

87.2

     

QTPYAK117

2

34

Mms. luminyensis

87.7

     

QTPYAK118

1

8

Mms. luminyensis

88.1

     

QTPYAK119

2

34

Mms. luminyensis

87.9

     

QTPYAK120

1

41

Mms. luminyensis

86.3

     

QTPYAK121

1

89

Mbb. smithii

96.2

     

QTPYAK122

1

44

Mms. luminyensis

87.9

     

QTPYAK123

1

58

Mms. luminyensis

87.9

     

QTPYAK124

1

78

Mms. luminyensis

88.1

     

QTPYAK125

1

59

Mms. luminyensis

89.1

     

QTPYAK126

1

59

Mms. luminyensis

89.2

     

QTPYAK127

1

74

Mms. luminyensis

88.1

     

QTPYAK128

1

2

Mms. luminyensis

87.7

     

QTPYAK129

2

38

Mms. luminyensis

88.2

     

QTPYAK130

1

65

Mms. luminyensis

88.7

     

QTPYAK132

1

58

Mms. luminyensis

88.9

     

QTPYAK133

1

60

Mms. luminyensis

88.7

     

QTPYAK134

1

2

Mms. luminyensis

87.3

     

QTPYAK135

1

21

Mms. luminyensis

87.1

     
  1. Mbb.= Methanobrevibacter; Mms=Methanomassiliicoccus; Mmb=Methanomicrobium; Mmc=Methanimicrococcus.
  2. *16S Sequences were obtained from MOTHUR program as unique sequences, while OTUs were generated by the MOTHUR program at 98% species level identity.