Table 1 Genome features of D.hafniense DCB-2 and D. hafniense Y51
Genome Features | D. hafnienseDCB-2 | D. hafnienseY51 |
|---|---|---|
Bases | 5279134 | 5727534 |
GC (%) | 0.48 | 0.47 |
Genes | 5042 | 5208 |
CDS | 4953 | 5060 |
rRNA; 5S, 16S, 23S | 5, 5, 5 | 6, 6, 6 |
tRNA | 74 | 59 |
Orthologs | 4834 (95.9%) | 4834 (92.8%) |
Paralogs | 1245 (24.7%) | 1369 (26.3%) |
Signal P* | 725 (14.4%) | 661 (12.7%) |
Transmembrane P** | 934 (18.5%) | 976 (18.7%) |
Tat signal P*** | 414 (8.2%) | 442 (8.5%) |
Horizontally transferred | 264 | 285 |
Genes with no homolog in other genome: | Â | Â |
total | 614 | 583 |
in COG | 164 | 186 |
no functional hit | 341 | 319 |
notable genes | reductive dehalogenase | Nar nitrate reductase |