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Table 2 Positively-selected sites in pldA of Helicobacter pylori

From: In silico evolutionary analysis of Helicobacter pylori outer membrane phospholipase A (OMPLA)

Site Residue Probability ω >1 Posterior probability
5 W 0.955* 1.48 ± 0.20
6 L 0.996** 1.52 ± 0.15
21 S 0.830 1.37 ± 0.33
27 I 1.000** 1.52 ± 0.14
34 R 0.576 1.15 ± 0.42
40 I 0.999** 1.52 ± 0.14
50 A 0.989* 1.51 ± 0.15
59 P 0.858 1.39 ± 0.29
137 D 1.000** 1.52 ± 0.14
144 D 0.760 1.32 ± 0.33
153 M 1.000** 1.52 ± 0.14
209 P 0.851 1.39 ± 0.31
211 G 0.836 1.38 ± 0.30
278 V 0.962* 1.48 ± 0.15
  1. PAML predicted that 14 sites were under positive selection (ω >1) using Bayes empirical Bayes analysis for the M8 model. One asterisk (*) signifies a probability >95% that ω >1, while two asterisks (**) signify a probability greater than 99%. The best ancestral reconstruction is indicated by the highest value in the final posterior probability column.