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Table 2 Metagenome overview

From: Metagenomic and geochemical characterization of pockmarked sediments overlaying the Troll petroleum reservoir in the North Sea

Metagenome OF1 OF2 Tplain Tpm1-1 Tpm1-2 Tpm2 Tpm3
Total sequence (M bases) 342 347 297 239 425 208 303
Total reads 914076 918989 850039 663131 1227131 607557 898796
Average read length (bases) 374 ± 128 378 ± 128 349 ± 134 361 ± 131 346 ± 131 343 ± 131 337 ± 131
Average GC content (%) 48.9 ± 10.7 47.5 ± 10.9 53.9 ± 10.7 49.9 ± 11.5 50.6 ± 12.0 49.3 ± 11.8 49.8 ± 11.0
EGS Mbp 4.9 4.8 5.1 4.7 5.0 4.6 5.0
Total reads assigned to the 16S rRNA gene1 926 914 861 776 1358 671 936
(% of total reads) 0.10 0.10 0.10 0.12 0.11 0.11 0.10
Total tDNA reads1 3256 3637 2235 2134 3481 2073 2529
(% of total reads) 0.36 0.40 0.26 0.32 0.28 0.34 0.28
  1. 1 the 16S rRNA gene and tDNA were identified by the WebMGA pipeline.
  2. The table shows general read-based information for the metagenomes.