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Table 1 Data of cyanobacterial 16S rRNA gene sequences

From: Gene copy number variation and its significance in cyanobacterial phylogeny

Species

Group

Genome size

# of copies

d1

F

F

R

R

Accession nr.

Acharyochloris marina MBIC11017

G1

8.36

2

0

5,636,175

 

1,409,149

 

CP000828.1

Anabaena variabilis ATCC 29413

G3

7.10

4

0

1,002,918

3,894,075

2,808,379

5,435,874

CP000117.1

Arthrospira platensis NIES 39

G1

6.80

2

0

  

2,584,861

3,509,612

AP011615

Cyanothece sp. PCC 7424

G1

6.52

3

0.001

1,328,842

3,465,297

2,494,023

 

CP001291.1

Cyanothece sp. PCC 8801

G1

4.81

2

0

3,806,018

 

2,484,826

 

CP001287.1

Gloeobacter violaceus PCC 7421

G0

4.70

1

   

1,571,231

 

BA000045.2

Microcystis aeruginosa NIES-843

G1

5.80

2

0.003

1,885,807

 

3,597,272

 

AP009552.1

Nostoc azollae 0708

G3

5.53

4

0

830,919

2,217,271

979,079

2,979,417

CP002059.1

Nostoc punctiforme PCC 73102

G3

9.01

4

0.002

2,021,489

6,085,170

5,515,629

6,502,973

CP001037.1

Nostoc sp. PCC 7120

G3

7.20

4

0

2,375,734

2,500,525

4,918,283

5,945,700

BA000019.2

Prochlorococcus marinus MIT 9211

G0

1.70

1

 

342,283

   

CP000878.1

Prochlorococcus marinus MIT 9303

G0

2.70

2

0

243,682

 

1,938,786

 

CP000554.1

P. marinus subsp. pastoris str. CCMP1986 (MED)

G0

1.70

1

 

313,061

   

BX548174.1

Synechococcus elongatus PCC 6301

G1

2.70

2

0

1,656,455

 

1,050,801

 

AP008231.1

Synechococcus sp. JA-3-3Ab

G1

2.90

2

0

2,310,397

 

1,110,127

 

CP000239.1

Synechococcus sp. PCC 7002

G1

3.40

2

0

1,461,361

 

2,909,371

 

CP000951.1

Synechococcus sp. RCC307

G1

2.20

1

 

348,765

   

CT978603.1

Synechococcus sp. WH 7803

G1

2.40

2

0

534,563

 

2,019,450

 

CT971583.1

Synechocystis sp. PCC 6803

G1

3.97

2

0

3,325,053

 

245,2187

 

BA000022.2

Thermosynechococcus elongatus BP-1

G1

2.59

1

   

2,335,243

 

BA000039.2

Trichodesmium erythraeum IMS101

G2

7.80

2

0

3,137,164

 

4,601,878

 

CP000393.1

Cyanobacterium UCYN-A

G0

1.40

2

0

638,681

 

3,507

 

CP001842.1

  1. d1: Largest distance between gene copies within the genome. F: Coordinates for the 16S rRNA genes on the forward strand of the chromosome. R: Coordinates for the 16S rRNA genes on the reverse strand of the chromosome.
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BMC Microbiology

ISSN: 1471-2180

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