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Table 1 Ten most up- and 10 most down-regulated genes in AGS cells in response to the infection with the different strains of H. pylori

From: Transcriptional profiling of gastric epithelial cells infected with wild type or arginase-deficient Helicobacter pylori

   Raw Signal Net Signal*
   H. pyloristrain H. pyloristrain
TargetID NS WT rocF- rocF + WT rocF- rocF +
IL8 130.5 531.8 4021.7 1276.8 401.3 3891.2 1146.3
S100A3 143.6 298.2 1488.3 463 154.6 1344.7 319.4
KRT17 1115.3 2555.1 11710.4 7149.9 1439.8 10595.1 6034.6
LCP1 214.4 351.2 1585.8 568.8 136.8 1371.4 354.4
SERPINB2 116.2 129.1 547.4 235.8 12.9 431.2 119.6
RND1 113.6 171.3 576 195.7 57.7 462.4 82.1
ACTG2 402.8 417.7 1388.5 723.4 14.9 985.7 320.6
SPOCD1 170.4 250.4 748 321.4 80 577.6 151
RASD1 157.5 192.8 563.6 269.5 35.3 406.1 112
PLAUR 450.2 1714 4856.2 1649.2 1263.8 4406 1199
RPP40 2648 1581.3 591.7 2117.1 −1066.7 −2056.3 −530.9
RRS1 596.6 397.5 148.2 477.9 −199.1 −448.4 −118.7
CABC1 1038.4 698.2 254.1 652.8 −340.2 −784.3 −385.6
ZNF239 591.8 389.4 139.8 409.2 −202.4 −452 −182.6
SLC1A3 1269.7 1028.9 364.7 875.9 −240.8 −905 −393.8
SOX2 652.5 373.5 126.3 389.7 −279 −526.2 −262.8
LOC91461 830.4 527.4 160.9 606.7 −303 −669.5 −223.7
FGD3 654.5 384.4 115 262.7 −270.1 −539.5 −391.8
ATF7IP2 1059 662.3 185.1 665.7 −396.7 −873.9 −393.3
DKK1 5514.2 2808.6 264.6 2722.3 −2705.6 −5249.6 −2791.9
  1. *Net signal is obtained by subtracting the raw value from the values obtained in H. pylori-infected AGS cells. NS, Non-infected AGS cells.