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Figure 2 | BMC Microbiology

Figure 2

From: Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut

Figure 2

Whole-genome alignments of Pav scaffolds to the most closely related reference sequences. A. Pav BP631 contigs aligned to Pto DC3000 reference sequence. Inset: Alignment of scaffold 88 to plasmid A from Pto DC3000 (this was done as a separate analysis). B. Pav Ve013 and Pav Ve037 contigs aligned to Psy B728a reference sequence. Each colored block represents a local colinearity block that can be aligned between strains without any rearrangements. White spaces within blocks indicate regions of low sequence conservation. Vertical red lines indicate scaffold breaks for Pav sequences or boundaries between chromosomes/plasmids in the case of the Pto DC3000 reference sequence. Alignments were generated using progressiveMauve [20].

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BMC Microbiology

ISSN: 1471-2180

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