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Table 4 Identification of observed TRF combinations

From: Diversity and dynamics of Archaea in an activated sludge wastewater treatment plant

AluI a RsaI a Clone libraryb RDP databasec
93 74 - Unclassified Euryarchaota
142 Out of ranged - Methanosarcina
176 74 Methanosaeta Methanosaeta
176 238/239 - Methanomicrobia
176 Out of range - Unclassified Euryarchaota
184/185 74/77 Methanosaeta Methanosaeta
    Unclassified Euryarchaota
    Thermoplasmatales
    Methanomicrobiales
    Methanosarcinales
184/185 142 - Unclassified Euryarchaota
184/185 238/239 Methanosaeta Methanosaeta
    Unclassified Euryarchaota
    Methanomicrobia
    Methanosarcinales
184/185 259 ARC I Unclassified Euryarchaota
    Thermoplasmatales
    Methanomicrobiales
184/185 Out of range - Unclassified Euryarchaota
    Unclassified Archaea
    Methanosarcinales
Out of range 74/77 - Unclassified Euryarchaota
    Unclassified Archaea
Out of range 238/239 - Unclassified Euryarchaota
    Methanosarcinales
Out of range 259 - Unclassified Euryarchaota
  1. a Observed TRF combinations that are not included in the table were not found in the database nor in the clone library. b Identification by comparison with predicted TRF lengths of clone library sequences. c Identification by comparison with predicted TRF lengths of RDP database sequences. d Out of range: The TRF in the database or the clone library was either shorter than 50 bases or longer than 1020 bases and would therefore not have been detected.