Strain or plasmid | Description | Source |
---|---|---|
Escherichia coli | Â | Â |
1830 | pro¯ met¯ Kanr Nmr, containing transposon Tn5 on the suicidal plasmid pBJ4JI | [44] |
DH5α | supE44ΔlacU169(Φ80lacZΔM15) hsdR17recA1 gyrA96thi-1relA1 | [39] |
BL21(DE3) | hsdS gal(λcIts857 ind1 Sam7 nin5 lac UV5-T7 gene 1) | [45] |
Pectobacterium carotovorum subsp. carotovorum | Â | Â |
3F-3 | Pcc, wild-type | Laboratory stock |
F-rif-18 | 3F3, Rifr, wild-type | This study |
TF1-1 | F-rif-18, fliC::Tn5, Rifr, Kanr | This study |
TF 1-2 | F-rif-18, CarocinS2::Tn5, Rifr, Kanr | This study |
SP33 | Pcc, wild-type | Laboratory stock |
Plasmid | Â | Â |
pMCL210 | p15A, Cmlr, Low copy number | [46] |
pGEM T-Easy | Ampr; lacZ cloning vector | Promega |
pET32a | Ampr; expression vector with the N-terminal His-tag | Novagen |
pET30b | Kanr; expression vector with the C-terminal His-tag | Novagen |
pMS2KI | 5.7-kb BamHI DNA fragment harboring carocin S2 gene from 3F3 genome, cloned into pMCL210 | This study |
pEN2K* | caroS2K subcloned into pET32a | This study |
pES2KI | Derived from pEN2K; deleted series of Tag element in front of expressed caroS2K | This study |
pEH2KI* | Derived from pES2KI; adding (His)6-Tag adjacent to caroS2I | This study |
pGS2I | caroS2I and its putative promoter from pMS2KI, subcloned into pGEM T-easy | This study |
pECS2I* | caroS2I subcloned into pET30b, but the expressed fusion CaroS2I has no activity | This study |
pES2I | Derived form pECS2I, the (His)6-Tag element was deleted | This study |