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Table 2 Genes differentially regulated for selected cell functions (p-value ≤ 0.05)

From: Mycobacterium tuberculosis septum site determining protein, Ssd encoded by rv3660c, promotes filamentation and elicits an alternative metabolic and dormancy stress response

ORF Gene Log 2expression   ORF Gene Log 2expression
   merodiploid mutant    merodiploid mutant
Fatty acid utilization   Ribosomal proteins  
Rv0974c accD2 1.2 -0.2 Rv0056 rplI -1.0 -0.6
Rv1935c echA13 0.9 -0.2 Rv0682 rpsL -0.9 -0.9
Rv2486 echA14 1.0 -0.1 Rv0700 rpsJ -1.4 -0.5
Rv0456c echA2 1.2 -0.1 Rv0701 rplC -1.5 -0.4
Rv3550 echA20 1.1 0.2 Rv0716 rplE -1.2 -0.9
Rv0971c echA7 1.3 -0.1 Rv0722 rpmD -0.9 -0.3
Rv3546 fadA5 1.1 0.1 Rv0723 rplO -0.7 -0.2
Rv1715 fadB3 1.0 -0.1 Rv2441c rpmA -0.9 -0.5
Rv0099 fadD10 1.2 0.0 Rv3442c rpsI -0.9 -0.2
Rv1550 fadD11 1.0 0.2 Rv3443c rplM -1.6 -0.5
Rv1058 fadD14 1.2 0.0 Rv3458c rpsD -0.8 -0.5
Rv3561 fadD3 0.8 0.5 Rv3460c rpsM -1.3 -0.6
Rv0035 fadD34 1.3 0.0 Rv3461c rpmJ -1.4 -0.6
Rv0214 fadD4 0.8 -0.2 Rv3924c rpmH -1.2 -0.7
Rv0551c fadD8 0.9 0.0     
Rv2590 fadD9 1.3 -0.5 Anaerobic respiration  
Rv0972c fadE12 1.4 -0.1 Rv0252 nirB 0.8 ndr
Rv0975c fadE13 1.3 ndr Rv0253 nirD 1.1 ndr
Rv3061c fadE22 1.0 -0.1 Rv0267 narU 1.2 ndr
Rv3505 fadE27 1.0 0.0 Rv1161 narG 0.7 ndr
Rv3544c fadE28 0.8 0.0 Rv1163 narJ 0.7 ndr
Rv3562 fadE31 1.0 0.2 Rv1164 narI 0.6 ndr
Rv3563 fadE32 0.8 0.4 Rv1552 frdA 1.2 ndr
Rv3564 fadE33 1.2 0.3 Rv1553 frdB 0.8 ndr
Rv0752c fadE9 0.9 -0.1 Rv1554 frdC 1.1 ndr
Rv1492 mutA 1.1 0.2 Rv1736c narX 1.1 ndr
Rv1493 mutB 1.2 0.5 Rv1737c narK2 1.9 0.2
Cell surface molecules   Electron Trpt/Redox  
Rv0399c lpqK 0.8 -0.1 Rv0409 ackA 1.0 0.2
Rv0405 pks6 1.2 -0.2 Rv0886 fprB 0.8 0.1
Rv0593 lprL 1.1 0.0 Rv1620c cydC 1.6 0.0
Rv0604 lpqO 0.8 -0.1 Rv1622c cydB 2.0 -0.2
Rv0794c lpdB 0.9 -0.2 Rv1623c appC 1.0 -0.2
Rv1064c lpqV 1.1 -0.1 Rv2007c fdxA 2.6 0.6
Rv1166 lpqW 0.8 0.0 Rv3251c rubA 0.8 -0.1
Rv1372 pks18 1.1 0.1     
Rv1661 pks7 1.3 -0.2 ATP synthesis   
Rv1662 pks8 1.0 0.2 Rv1304 atpB 0.2 -0.6
Rv1663 pks17 1.2 0.2 Rv1305 atpE 0.2 -0.4
Rv1664 pks9 1.1 0.1 Rv1306 atpF 0.0 -0.7
Rv1665 pks11 0.7 0.2 Rv1307 atpH 0.2 -0.6
Rv1921c lppF 1.4 0.2 Rv1308 atpA 0.3 -0.4
Rv1946c lppG 1.0 0.1 Rv1309 atpG -0.1 -0.7
Rv1966 mce3 1.1 0.0 Rv1310 atpD 0.3 -0.4
Rv2270 lppN 0.9 -0.1 Rv1311 atpC 0.2 -0.4
Rv2330c lppP 0.7 0.1     
Rv2543 lppA 0.9 0.2 ndr = not differentially regulated  
Rv2796c lppV 0.8 0.0