From: Quinolone resistance in Escherichia coli from Accra, Ghana
Strains | Nali-dixic acid MIC mg/L | Resistance pattern* | QRDR mutations | Horizontally acquired quinolone resistance genes | Allelic profile | Sequence type (ST) | ST complex | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  | Δ GyrA | Δ ParC |  | adk | fumC | gyrB | icd | mdh | purA | recA |  |  |
2006 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
06/073 | 64 | AC NSLTR | none | none | none | 6 | 19 | 15 | 16 | 9 | 8 | 7 | 443 | 205 |
06/079 | 128 | AC NSLTR | none | none | none | 6 | 65 | 2 | 25 | 5 | 5 | 2 | 1466 | none |
06/137 | 128 | AC NSLTR | none | none | none | 6 | 65 | 2 | 25 | 5 | 5 | 2 | 1466 | none |
06/065 | 128 | A NSLTR | none | none | qnrS1 | 6 | 7 | 5 | 1 | 8 | 18 | 2 | 206 | 206 |
06/036 | 256 | AC NSLTR | none | none | none | 6 | 8 | 4 | 1 | 9 | 48 | 7 | 210 | none |
06/027 | 64 | C N | S83L | none | qnrB2 | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
06/045 | 64 | A NSLTR | S83L | none | none | 10 | 174 | 4 | 8 | 8 | 8 | 2 | 1286 | 10 |
06/056 | 128 | A NSLTR | S83L | none | none | 112 | 11 | 5 | 12 | 8 | 8 | 86 | 542 | none |
06/068 | 128 | AC NSLTR | S83L | none | none | 76 | 43 | 19 | 37 | 30 | 1 | 2 | 1465 | none |
06/151 | >1024 | ACPNSLTR | S83L, D87N | none | none | 43 | 41 | 15 | 18 | 11 | 7 | 6 | 101 | 101 |
06/154 | >1024 | ACPN TR | S83L, D87N | none | qnrB1 | 43 | 41 | 15 | 18 | 11 | 7 | 6 | 101 | 101 |
06/030 | >1024 | ACPN LTR | S83L, D87N | S80I | qnrS1 | 10 | 11 | 4 | 8 | 8 | 13 | 73 | 617 | 10 |
06/110 | >1024 | ACPNSLTR | S83L, D87N | S80I | none | 92 | 4 | 87 | 96 | 70 | 58 | 2 | 648 | none |
06/148 | >1024 | A PNSLTR | S83L, D87N | S80I | none | 92 | 4 | 87 | 96 | 70 | 58 | 2 | 648 | none |
06/026 | >1024 | ACPNSLTR | S83L, D87N | S80I, N105S | none | 56 | 6 | 22 | 16 | 11 | 1 | 7 | 455 | None |
06/112 | >1024 | ACPN LTR | S83L, D87N | S80I, E84K | none | 6 | 29 | 32 | 16 | 11 | 8 | 44 | 156 | 156 |
2007 | Â | Â | Â | Â | none | Â | Â | Â | Â | Â | Â | Â | Â | Â |
07/16a | 256 | A PNSLT | none | none | none | 6 | 95 | 4 | 18 | 11 | 7 | 14 | 1304 | none |
07/34 | 128 | AC N LTR | none | none | none | 10 | 11 | 4 | 12 | 7 | 8 | 2 | 1467 | none |
07/12 | 64 | NSLT | S83L | none | none | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
07/37 | 128 | A N L R | S83L | T66I | none | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
07/SHA | >1024 | A PNSLTR | S83L, D87N | none | none | 6 | 11 | 95 | 104 | 8 | 7 | 2 | 450 | none |
07/375 | >1024 | A PNSLTR | S83L, D87N | S80I | qepA | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
07/337 | >1024 | A PN LTR | S83L, D87N | S80I | none | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
07/282 | >1024 | ACPNSLTR | S83L, D87N | E84K | qepA | 6 | 29 | 32 | 16 | 11 | 8 | 44 | 156 | 156 |
07/24A | >1024 | ACPNSLTR | S83L, D87N | S80I, E84G | qnrB1 | 85 | 88 | 78 | 29 | 59 | 58 | 62 | 354 | 354 |
2008 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
08/54 | 64 | AC NSLTR | none | none | none | 6 | 99 | 22 | 1 | 8 | 7 | 2 | 1479 | 206 |
08/23 | 64 | ACPNSLTR | none | none | none | 10 | 29 | 4 | 8 | 8 | 8 | 44 | 1473 | 156 |
08/43 | 128 | A NSLTR | none | none | none | 6 | 7 | 14 | 1 | 8 | 18 | 2 | 1471 | l206 |
08/33 | >1024 | ACPNSLTR | none | none | qnrS1 | 6 | 11 | 14 | 8 | 8 | 6 | 6 | 1469 | None |
08/91 | >1024 | ACPNSLTR | none | none | none | 10 | 11 | 4 | 1 | 8 | 9 | 2 | 227 | 10 |
08/101 | 64 | A NSLTR | S83A | none | qnrS1 | 10 | 11 | 4 | 1 | 8 | 9 | 2 | 227 | 10 |
08/78 | 128 | ACPNSLTR | S83L | none | qnrS1 | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
08/90 | 256 | ACPNSLTR | S83L, D87N | S80I | none | 6 | 4 | 12 | 1 | 20 | 18 | 7 | 410 | 23 |
08/11 | >1024 | A PNSLTR | S83L, D87N | S80I | none | 6 | 6 | 5 | 26 | 11 | 8 | 6 | 1468 | none |
08/26 | >1024 | A PN LTR | S83L, D87N | S80I | qnrS1 | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
08/87 | >1024 | A NSLTR | S83L, D87N | S80I | none | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
08/84 | >1024 | A NSLTR | S83L, D87N | S80I | qnrS1 | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
08/93 | >1024 | A PNSLTR | S83L, D87N | S80I | none | 10 | 11 | 4 | 8 | 8 | 8 | 2 | 10 | 10 |
08/17 | >1024 | ACPNSLTR | S83L, D87N | S80I, E84V | none | 53 | 40 | 47 | 13 | 36 | 28 | 29 | 131 | none |
08/39 | >1024 | ACPNSLTR | S83L, D87N | S80I, A108V | none | 92 | 40 | 87 | 96 | 70 | 8 | 29 | 1470 | none |