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Table 1 Enterococcus faecalis isolates used in this study. CC; clonal complex, CGH; comparative genomic hybridization, MLST; multilocus sequence typing, S; singleton, ST; sequence type.

From: Comparative genomic analysis reveals significant enrichment of mobile genetic elements and genes encoding surface structure-proteins in hospital-associated clonal complex 2 Enterococcus faecalis

Strain Year Country Source MLST Application Reference
     ST CC   
TX0104   USA Clinical 2 2 In silico [65]
609/96 1996 Poland Wound 6 2 CGH, PCR [25]
372-56 2007 Norway Blood 6 2 CGH, PCR  
226B 2005 Norway Feces 6 2 PCR [27]
368-42 2007 Norway Blood 6 2 PCR  
442/05 2005 Poland CSF 6 2 PCR [25]
E1828 2001 Spain Blood 6 2 PCR [26]
MMH594 1985 USA Clinical 6 2 CGHC, PCR [66]
V583 1989 USA Blood 6 2 CGH, PCR [67]
158B 2005 Norway Feces 6 2 CGHB, PCR [27]
HH22 ≤1982 USA Urine 6 2 In silico [29]
LMGT3303     6 2 CGHD, PCR  
E1834 2001 Spain Blood 51 2 CGH, PCR [26]
E4250 2007 Netherlands Feces 183 2 CGH, PCR  
HIP11704 2002 USA Clinical 4 4 In silico [68]
E1841 2001 Spain Blood 9 9 CGH, PCR [26]
Vet179 1999 Norway Dog_urine 9 9 CGHD, PCR [69]
CH188 1980s USA Liver 9 9 In silico [70]
E1807 2002 Spain Feces 17 9 CGH, PCR [26]
X98 1934   Feces 19 19 In silico [71]
OG1RF ≤1975 USA Oral 1 21 CGHC, PCR [72]
E1960 2001 Spain Feces 8 21 CGH, PCR [26]
T8 ≤1992 Japan Urine 8 21 In silico [73]
2426/03 2003 Poland Feces 21 21 CGH, PCR [25]
ATCC 29200 ≤1974 Canada Urogenital 21 21 In silico [74]
T1 ≤1950    21 21 In silico [73]
LMGT3406 1999 Denmark Poultry_feces 22 21 CGHD, PCR  
111A 2005 Norway Feces 161 21 CGHB, PCR [27]
TX1322   USA   161 21 In silico [65]
3339/04 2004 Poland Blood 23 25 CGH, PCR [25]
UC11/46   Finland Feces 97 25 CGH, PCR [19]
189 2002-2003 Norway Feces 162 25 CGHB, PCR [27]
Symbioflor 1   Germany Feces 248 25 CGHC, PCR [75]
T2 ≤1992 Japan Urine 11 28 In silico [73]
E1188 1997 Greece Blood 28 28 CGH, PCR [26]
383/04 2004 Poland Blood 87 28 CGH, PCR [25]
E1052   Netherlands Feces 30 30 CGHD, PCR  
85 2008 Norway Feces 30 30 CGHB, PCR [27]
597/96 1996 Poland Ulcer 40 40 CGH, PCR [25]
LMGT2333   Iceland Fish 40 40 CGHD, PCR  
JH1 ≤1974 United Kingdom Clinical 40 40 In silico [76]
LMGT3209   Greece Food_cheese 40 40 CGHD, PCR  
1645 2007 Denmark Blood 220 40 CGH, PCR  
29C 2004 Norway Feces 44 44 CGHB, PCR [27]
92A 2005 Norway Feces 44 44 CGHB [27]
DS5 ≤1974    55 55 In silico [77]
E2370   Hungary Wound 16 58 CGH, PCR  
105 2002-2003 Norway Feces 16 58 CGHB, PCR [27]
D6   Denmark Pig 16 58 In silico [31]
E1Sol 1960s Solomon Islands Feces 93 93 In silico [78]
Merz96 2002 USA Blood 103 103 In silico [79]
R712   USA Clinical 103 103 In silico [65]
S613   USA Clinical 103 103 In silico [65]
LMGT3405 1999 Denmark Poultry_feces 116 116 CGHD, PCR  
LMGT3407 1999 Denmark Poultry_feces 34 121 CGHD, PCR  
Fly1 2005 USA Drosophila 101 101A In silico [31]
Vet138 1998 Norway Dog_ear 164 119A CGHD, PCR [69]
82 2008 Norway Poultry_feces 65 S CGHD, PCR  
T11 ≤1992 Japan Urine 65 S In silico [73]
62 2002-2003 Norway Feces 66 S CGHB, PCR [27]
ATCC 4200 1926   Blood 105 S In silico  
AR01/DG 2001 New Zealand Dog 108 S In silico [80]
266 2002-2003 Norway Feces 163 S CGHB, PCR [27]
LMGT3143   Spain Animal_wood pigeon 165 S CGHD, PCR  
LMGT3208   Greece Food_cheese 166 S CGHD, PCR  
84 2008 Norway Poultry_feces 249 S CGHD, PCR  
TuSoD ef11   USA Clinical 364 S In silico [65]
  1. AClonal complexes were no predicted founder was proposed by eBURST.
  2. BIn Solheim et al. 2009.
  3. CIn Vebø et al. 2010.
  4. DMS, unpublished work.