Strain
|
Year
|
Country
|
Source
|
MLST
|
Application
|
Reference
|
---|
| | | |
ST
|
CC
| | |
---|
TX0104
| |
USA
|
Clinical
|
2
|
2
|
In silico
|
[65]
|
609/96
|
1996
|
Poland
|
Wound
|
6
|
2
|
CGH, PCR
|
[25]
|
372-56
|
2007
|
Norway
|
Blood
|
6
|
2
|
CGH, PCR
| |
226B
|
2005
|
Norway
|
Feces
|
6
|
2
|
PCR
|
[27]
|
368-42
|
2007
|
Norway
|
Blood
|
6
|
2
|
PCR
| |
442/05
|
2005
|
Poland
|
CSF
|
6
|
2
|
PCR
|
[25]
|
E1828
|
2001
|
Spain
|
Blood
|
6
|
2
|
PCR
|
[26]
|
MMH594
|
1985
|
USA
|
Clinical
|
6
|
2
|
CGHC, PCR
|
[66]
|
V583
|
1989
|
USA
|
Blood
|
6
|
2
|
CGH, PCR
|
[67]
|
158B
|
2005
|
Norway
|
Feces
|
6
|
2
|
CGHB, PCR
|
[27]
|
HH22
|
≤1982
|
USA
|
Urine
|
6
|
2
|
In silico
|
[29]
|
LMGT3303
| | | |
6
|
2
|
CGHD, PCR
| |
E1834
|
2001
|
Spain
|
Blood
|
51
|
2
|
CGH, PCR
|
[26]
|
E4250
|
2007
|
Netherlands
|
Feces
|
183
|
2
|
CGH, PCR
| |
HIP11704
|
2002
|
USA
|
Clinical
|
4
|
4
|
In silico
|
[68]
|
E1841
|
2001
|
Spain
|
Blood
|
9
|
9
|
CGH, PCR
|
[26]
|
Vet179
|
1999
|
Norway
|
Dog_urine
|
9
|
9
|
CGHD, PCR
|
[69]
|
CH188
|
1980s
|
USA
|
Liver
|
9
|
9
|
In silico
|
[70]
|
E1807
|
2002
|
Spain
|
Feces
|
17
|
9
|
CGH, PCR
|
[26]
|
X98
|
1934
| |
Feces
|
19
|
19
|
In silico
|
[71]
|
OG1RF
|
≤1975
|
USA
|
Oral
|
1
|
21
|
CGHC, PCR
|
[72]
|
E1960
|
2001
|
Spain
|
Feces
|
8
|
21
|
CGH, PCR
|
[26]
|
T8
|
≤1992
|
Japan
|
Urine
|
8
|
21
|
In silico
|
[73]
|
2426/03
|
2003
|
Poland
|
Feces
|
21
|
21
|
CGH, PCR
|
[25]
|
ATCC 29200
|
≤1974
|
Canada
|
Urogenital
|
21
|
21
|
In silico
|
[74]
|
T1
|
≤1950
| | |
21
|
21
|
In silico
|
[73]
|
LMGT3406
|
1999
|
Denmark
|
Poultry_feces
|
22
|
21
|
CGHD, PCR
| |
111A
|
2005
|
Norway
|
Feces
|
161
|
21
|
CGHB, PCR
|
[27]
|
TX1322
| |
USA
| |
161
|
21
|
In silico
|
[65]
|
3339/04
|
2004
|
Poland
|
Blood
|
23
|
25
|
CGH, PCR
|
[25]
|
UC11/46
| |
Finland
|
Feces
|
97
|
25
|
CGH, PCR
|
[19]
|
189
|
2002-2003
|
Norway
|
Feces
|
162
|
25
|
CGHB, PCR
|
[27]
|
Symbioflor 1
| |
Germany
|
Feces
|
248
|
25
|
CGHC, PCR
|
[75]
|
T2
|
≤1992
|
Japan
|
Urine
|
11
|
28
|
In silico
|
[73]
|
E1188
|
1997
|
Greece
|
Blood
|
28
|
28
|
CGH, PCR
|
[26]
|
383/04
|
2004
|
Poland
|
Blood
|
87
|
28
|
CGH, PCR
|
[25]
|
E1052
| |
Netherlands
|
Feces
|
30
|
30
|
CGHD, PCR
| |
85
|
2008
|
Norway
|
Feces
|
30
|
30
|
CGHB, PCR
|
[27]
|
597/96
|
1996
|
Poland
|
Ulcer
|
40
|
40
|
CGH, PCR
|
[25]
|
LMGT2333
| |
Iceland
|
Fish
|
40
|
40
|
CGHD, PCR
| |
JH1
|
≤1974
|
United Kingdom
|
Clinical
|
40
|
40
|
In silico
|
[76]
|
LMGT3209
| |
Greece
|
Food_cheese
|
40
|
40
|
CGHD, PCR
| |
1645
|
2007
|
Denmark
|
Blood
|
220
|
40
|
CGH, PCR
| |
29C
|
2004
|
Norway
|
Feces
|
44
|
44
|
CGHB, PCR
|
[27]
|
92A
|
2005
|
Norway
|
Feces
|
44
|
44
|
CGHB
|
[27]
|
DS5
|
≤1974
| | |
55
|
55
|
In silico
|
[77]
|
E2370
| |
Hungary
|
Wound
|
16
|
58
|
CGH, PCR
| |
105
|
2002-2003
|
Norway
|
Feces
|
16
|
58
|
CGHB, PCR
|
[27]
|
D6
| |
Denmark
|
Pig
|
16
|
58
|
In silico
|
[31]
|
E1Sol
|
1960s
|
Solomon Islands
|
Feces
|
93
|
93
|
In silico
|
[78]
|
Merz96
|
2002
|
USA
|
Blood
|
103
|
103
|
In silico
|
[79]
|
R712
| |
USA
|
Clinical
|
103
|
103
|
In silico
|
[65]
|
S613
| |
USA
|
Clinical
|
103
|
103
|
In silico
|
[65]
|
LMGT3405
|
1999
|
Denmark
|
Poultry_feces
|
116
|
116
|
CGHD, PCR
| |
LMGT3407
|
1999
|
Denmark
|
Poultry_feces
|
34
|
121
|
CGHD, PCR
| |
Fly1
|
2005
|
USA
|
Drosophila
|
101
|
101A
|
In silico
|
[31]
|
Vet138
|
1998
|
Norway
|
Dog_ear
|
164
|
119A
|
CGHD, PCR
|
[69]
|
82
|
2008
|
Norway
|
Poultry_feces
|
65
|
S
|
CGHD, PCR
| |
T11
|
≤1992
|
Japan
|
Urine
|
65
|
S
|
In silico
|
[73]
|
62
|
2002-2003
|
Norway
|
Feces
|
66
|
S
|
CGHB, PCR
|
[27]
|
ATCC 4200
|
1926
| |
Blood
|
105
|
S
|
In silico
| |
AR01/DG
|
2001
|
New Zealand
|
Dog
|
108
|
S
|
In silico
|
[80]
|
266
|
2002-2003
|
Norway
|
Feces
|
163
|
S
|
CGHB, PCR
|
[27]
|
LMGT3143
| |
Spain
|
Animal_wood pigeon
|
165
|
S
|
CGHD, PCR
| |
LMGT3208
| |
Greece
|
Food_cheese
|
166
|
S
|
CGHD, PCR
| |
84
|
2008
|
Norway
|
Poultry_feces
|
249
|
S
|
CGHD, PCR
| |
TuSoD ef11
| |
USA
|
Clinical
|
364
|
S
|
In silico
|
[65]
|
- AClonal complexes were no predicted founder was proposed by eBURST.
- BIn Solheim et al. 2009.
- CIn Vebø et al. 2010.
- DMS, unpublished work.